Halorhodospira halochloris: HH1059_12930
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Entry
HH1059_12930 CDS
T06158
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03030
DNA replication
hhk03430
Mismatch repair
hhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH1059_12930
03430 Mismatch repair
HH1059_12930
03440 Homologous recombination
HH1059_12930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhk03032
]
HH1059_12930
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_12930
Enzymes [BR:
hhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH1059_12930
DNA replication proteins [BR:
hhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HH1059_12930
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HH1059_12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
HolB_lid
AAA_16
nSTAND3
AAA_25
AAA_5
Mg_chelatase
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BAU58001
UniProt:
A0A120MZW6
LinkDB
All DBs
Position
complement(1403095..1404255)
Genome browser
AA seq
386 aa
AA seq
DB search
MASRRQNTGAVKTKGAKSQQPLEQGDKQQQGASEDDVHQALIQGSSDLAPWLVPELERSL
GLFDAGRLHHALLLSGRTGLGKSFLAMALARALLCDLNQGGGGGGSPTSAAQRPCGECKS
CRLTAAGNHPDMRLLGPNKAGERGEIVVDTVRGLIEFLHLSAQLGGTKVAVIVPCDRLNR
SAANSLLKTLEEPPQGVFLILATGRPGRLPATVRSRCTIHQLPSPRLDEAQLWLSGHHNL
SSEKLRQALVLCGGMPFSAHNMLHQHGLDRLEALLQQLHRLSAGGDPIKEAQMWQDNPHV
LAEMLTAVIAELLRRKHGGSMLGMLPAALSERLADATPLDSLHQVFEQITAHRRHLEQPL
QGRLAAEAIFIDLSTALWGRAARSVL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaggcggcaaaacactggtgctgttaagaccaaaggcgctaaatcgcagcag
cctttagagcaaggtgataagcagcagcaaggtgctagcgaagatgatgtgcaccaggcg
cttattcagggcagctctgatctagcaccgtggcttgtgcccgaattggagcgttcgctc
ggtctcttcgacgcgggtagactccatcatgcgctgctcctgagtggccgtaccggtttg
ggcaagagctttctggccatggctttggcccgggccttgttgtgtgatcttaaccaaggg
ggtgggggcggtggcagccccactagcgctgcacagcgcccctgtggggagtgtaagtca
tgccggttgaccgccgccggcaatcatcccgatatgcgcctgctgggtccgaataaagct
ggtgagcgcggtgaaatagtcgtcgatacagtccgtggcctgattgagtttctccacctc
agtgcccaactcggcggcaccaaggttgcggtgattgtgccgtgtgaccggctcaaccgc
tcggccgctaacagccttctcaagaccttggaagagccgccccaaggagtctttttgatc
ctcgctaccggtcgccctggtagattacccgctacagtccgcagtcgctgcacaattcac
cagctaccttcccctcggctggatgaggcacagctttggttgtctggccaccacaacctc
agttctgaaaagctacgccaagcccttgttctgtgtggtggcatgcctttcagtgcgcac
aacatgctgcatcagcacggtttggacaggctagaggccttattgcagcagctgcatcgg
ttaagcgccggtggcgacccaatcaaagaagcccagatgtggcaggataatccgcatgtt
ttggcggaaatgctaactgcagtgattgccgagttgctgcggcgtaagcacggcggttca
atgctaggcatgctgcctgctgcgcttagcgaaagattggccgatgccacgccgctggat
tcactccaccaagtcttcgagcagatcaccgcccataggcgccatttagagcagcctctc
caaggtcgcctagctgctgaagctattttcattgatttatcgacagccttgtggggcagg
gcggctagaagtgtcctataa
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