Halorhodospira halochloris: HH1059_17190
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Entry
HH1059_17190 CDS
T06158
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HH1059_17190 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhk03019
]
HH1059_17190 (rhlB)
Enzymes [BR:
hhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HH1059_17190 (rhlB)
Messenger RNA biogenesis [BR:
hhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HH1059_17190 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAU58431
UniProt:
A0A0X8XAE6
LinkDB
All DBs
Position
1892015..1893289
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AA seq
424 aa
AA seq
DB search
MSETHLTKQLITELPIHDAVLDGLEEAGFTNCTPIQAETLPRTLNGESIAGEAQTGTGKT
AAFVVATLHHLMTYPVEEDAVGPWAIMLAPTRELALQIHREAELIGAYTGLKFAAVYGGT
GYESQRRQLRDGVDVIIGTPGRIIDFYKQKIFNLRSIEVVVLDEADRMFDLGFVADIRYL
LRRMPSAEQRLNLLFSATLSYRVMELAWEHMGDPARIAVESEQRTADHIRQILYHVAKED
KTSFLVGMLQQIDPRRTLVFANTKRAAEQLVGYLRGNGIEAAVISGDIPQNKREKLLEKF
RTGELPVLVGTDVAARGLHIDAVSHVINFDLPQDAEDYVHRIGRTARAGESGDAITLACD
EYVFSLPDIESYLDFKIPSAAPPAEYFIELAPPKRPRSPRKNTARRSASNSRHNRSRGNH
RAAR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacccatttaaccaaacagttaatcaccgaactacccatccacgatgccgtc
ctcgatggccttgaggaagccgggttcaccaattgcacccccatccaggccgaaactctc
ccacgcaccctaaacggagaaagcatagcaggtgaagcacagaccggcactggcaaaact
gcggccttcgtggttgccaccctgcatcacctgatgacctacccggttgaagaggatgca
gtcggcccgtgggcgataatgctcgcccccacgcgtgagttggcgttacagatccaccgt
gaagccgaactgataggcgcttataccgggcttaaatttgcggctgtctatggcggcact
ggctacgaatcccaacgccgacaactgcgtgatggcgtagatgtgataatcggcaccccc
gggcggatcatcgatttctataaacagaagatattcaacctgcgcagcattgaggttgta
gtactggatgaggccgacaggatgtttgatcttggttttgtggccgacatccgctatcta
ctcagacgcatgccatcagctgagcagcgcctcaacttactcttctctgctaccctctcc
taccgggtgatggagttagcctgggagcatatgggcgatccggcgcgcatagctgtggag
agtgagcaacgcactgctgatcacatccggcagatcctctaccatgtcgccaaggaggat
aaaacctcctttctagtcggcatgctgcagcaaatcgaccctcgccgcactctagtattc
gccaacaccaagcgcgccgcggagcagcttgtcggctacctaaggggcaacggcattgaa
gcggcggtcatctccggggatattccgcaaaacaaacgcgagaaactactcgaaaagttc
cgcaccggggaactgccggttttagtgggcactgatgtggcggctcggggactgcatatt
gacgcagtaagccacgttatcaacttcgacctaccccaagacgccgaagactacgtccac
cgtatcgggagaacggcgcgcgccggagaaagcggcgatgctataaccttagcgtgcgat
gagtatgtcttctcattgccagatattgagtcttaccttgatttcaagatccccagcgct
gcgccgccagcggagtactttattgagctagcgccgcccaagcggccgcgctccccgcgc
aaaaacactgctcgccggtcggcgagcaacagcagacacaaccggagccggggcaatcac
agggctgcccgatga
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