Halorhodospira halochloris: HH1059_18580
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Entry
HH1059_18580 CDS
T06158
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
hhk
Halorhodospira halochloris
Pathway
hhk02020
Two-component system
hhk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HH1059_18580 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HH1059_18580 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhk03021
]
HH1059_18580 (rpoN)
Transcription machinery [BR:
hhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HH1059_18580 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
LexA_DNA_bind
HTH_21
HTH_38
HTH_12
Motif
Other DBs
NCBI-ProteinID:
BAU58547
UniProt:
A0A0X8XBI7
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All DBs
Position
2028963..2030435
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AA seq
490 aa
AA seq
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MKQTLQLRVGQQLAMTPQLQQAIRLLQLSSLELHNEIQQALESNLMLETDEGEETSVADK
SNQDQNAEEQPSGEAIPDELPLDTSWEDIYDASYACASPGADSATDILENRSSNPQGLIE
HLLWQVEMEDLTESERLVAEIIVDSIDEDGYLQSSVEEIHGQLPTSIHFSPSDVESILAR
IQRLDPHGIAARSPAEALFIQLEQLPETTPWRGEAMEIVLNHLERVAEQRYDEIQAELGL
SGSAVDETLELIRSLDPRPGQQLSNSAPEYIIPDVTVFRQDGAWHVELNREMTPTLRINP
YYASLVKRGDTSADNHCLRTHLQEARWLLKSLQSRNETLLKVASAIVDRQREFMDHGEEA
MQPLVLREIAETIDMHESTISRITTNKYMYTPRGTYEFKYFFSSHVSTTDGGEASATAIR
ARIKRLISAEETSKPLSDSAIAESLRDEGIKVARRTVAKYRESLGIASSSQRKVKQRGYG
NKTQAAELRK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaacgcttcagctaagagtgggccaacagctggccatgacgcctcagttacag
caggccattcggctgctgcagctgtctagtctcgaattgcataacgaaatccagcaggcg
ctggaatccaatctaatgctggagactgatgagggcgaagagacaagcgttgcagacaag
tcaaatcaggatcaaaacgcggaagagcaacctagcggtgaggcaatacccgacgaacta
cccttggataccagctgggaagatatttatgacgccagctacgcctgcgcatccccagga
gctgattcagccacagacatcttagagaatcgcagctccaacccccagggactgatagag
catttgctctggcaagtggagatggaggaccttaccgagagtgaacgtttagttgccgag
atcattgttgattctattgatgaggacggctacctccagtcaagtgttgaagagatacac
ggccagcttccgacaagcatccatttcagccctagcgatgtggagtctatccttgcccgt
atccagcgcttggatccgcatggcatagccgctcgatcacctgcagaggcactttttatt
cagcttgagcaactccccgaaaccacaccttggcgaggggaagcgatggaaatagtcctc
aaccacttggaacgagtcgccgagcagcgctatgacgagatacaagccgagctaggcttg
agtggctcggctgttgacgaaacactcgaactgatcaggagcctcgatcctcggccgggt
caacaactgagcaactctgcaccagagtacatcattcctgacgttaccgtattccgccag
gacggcgcttggcatgttgaactcaatcgcgagatgacgcctactctacggatcaacccc
tactacgccagtctcgttaaacgcggcgatactagtgccgataatcactgtttacggacc
cacctccaggaggctcgctggttgttaaagagcttgcaaagccgcaatgagacgctgctt
aaggtggccagcgccatcgtcgatcggcaaagagagttcatggaccacggcgaggaggcc
atgcagcctctggtattgcgcgagatagccgagacaattgacatgcatgagtctacaata
tcgcggataacaaccaacaaatacatgtacacaccacgtgggacgtatgagttcaagtac
tttttttccagtcacgtaagcaccacagatggaggtgaggcatctgctactgccatccgg
gcacgaataaaacgcttgataagcgctgaagagaccagcaaaccgcttagtgacagcgcc
atcgctgaatctctcagggatgagggcatcaaggtagcacgtaggaccgtagccaagtat
cgtgaatctttgggcattgcctcgtcttcgcaacgcaaagtcaaacaaagaggctacggc
aataagacgcaagctgcagaacttcgcaaatga
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