Halorhodospira halochloris: HH1059_22020
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Entry
HH1059_22020 CDS
T06158
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HH1059_22020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhk03021
]
HH1059_22020 (rpoA)
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_22020 (rpoA)
Enzymes [BR:
hhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HH1059_22020 (rpoA)
Transcription machinery [BR:
hhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HH1059_22020 (rpoA)
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HH1059_22020 (rpoA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BAU58911
UniProt:
A0A0X8XBI1
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All DBs
Position
complement(2420988..2421986)
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AA seq
332 aa
AA seq
DB search
MKGYIKDFLKPRSVEIDPINDRRAKVVLEPLERGFGHTLGNALRRLLLSSMPGTAVTEVE
IEGVQHEYTAIDGVHEDTVDILLNLKDLAIRLHERDSVTLKLHKQGPGPVTGADVVTDHG
VEIVNPELHLATLTREQEFKASLKIERGRGYLPVTAREEEETRSIGHLAIDASFSPVRRV
AYAVESARVEQRTDLDKLVLDVETNGVVSPEEAVKFAATLLREQLSVFVDLQGGTLESEE
PQKEQELDPILLRPIDDLELTVRSANCLKAESIHYVGDLVQRSEVELLKTPNLGKKSLNE
IKDTLESHGLSLGMQLDNWPPPSLGDRARIAG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttacataaaagattttctaaaaccacgctcggttgagatagatcctattaac
gaccggcgtgctaaggtggttctagaaccccttgagcgcgggtttggccatacgttgggc
aacgccctgcgtcggctgctgctatcttcgatgccgggtaccgccgttactgaagtcgaa
attgaaggagttcagcacgaatacaccgcgatagatggtgtgcacgaggatacggtcgat
atactgctcaatctgaaggacctagccattcgcctccacgagcgtgactcagtgacgctt
aagcttcacaagcaggggccaggtcccgtcacgggtgctgacgttgtaaccgatcacggc
gtcgagatagtcaaccctgagcttcatctggccacgttaactcgggagcaagagtttaag
gcctctctgaagattgagcggggtaggggttacttgcctgtaaccgcgcgggaggaagaa
gagacaagatcaattggccacctagcgatagatgctagctttagccctgtgaggcgagtg
gcttatgcggtggaaagcgctcgtgtcgagcagcgtaccgatcttgataagctcgtgctt
gatgtagagactaacggggtggtttcgcctgaggaggcggtcaagtttgcagctaccctg
ctgcgcgagcagttgtcagtattcgttgatctgcagggtggaacactcgagagcgaggag
cctcagaaagagcaggagctcgatccaattctgcttcggccgatagatgatctagaactt
actgtgcgctcagccaactgcttaaaagccgaaagcattcactacgtcggagatttggtc
cagcgtagcgaagtggagctgctcaagactcccaatttaggcaaaaaatcgctgaacgaa
atcaaagataccctggagtcacatgggttgtccttgggtatgcagcttgataattggcct
ccgccgtctcttggagatcgggcgcgaattgccggctga
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