Halorhodospira halochloris: HH1059_23240
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Entry
HH1059_23240 CDS
T06158
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH1059_23240 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_23240 (uvrA)
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH1059_23240 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HH1059_23240 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_16
SMC_N
AAA_29
nSTAND1
AAA_23
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
MeaB
nSTAND3
cobW
Viral_helicase1
Zn_ribbon_8
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
BAU56393
UniProt:
A0A120MZI5
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All DBs
Position
2539185..2542034
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AA seq
949 aa
AA seq
DB search
MDYIRIRGARTHNLRNVDVDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMDKPDVDHIEGLSPAISVEQKRASHNPRSTVATVTEIHDYLRLLFARVGTPHC
PEHGIALHASSVSEMVDRLLAEPQGSKMMLLAPIEHPSGSAQQTCEQLRAQGFIRARIDG
VIRELEQTPQVSADQDHQIEAVIDRFRIRDDLAGRLADSLETALAISDGIVRAGWLDEPE
REPLTFSTRYSCPQCGYSVEPLEPRMFSFNNPNGACPSCDGLGVEHHFDPAKVVSRPQLA
PAEGAIRGWDRRNAYYFNLLEGLAEHYGFDITTPWENLTDEVREVMLYGSGDEEIEFRYP
TRSGETVHCHPFEGVIPNLQRRYREAESATVREELGRYISERLCRECQGSRLNERARNVS
VAGYKLAELAALPIHEAHQRFGNLELTGSRATIAAPVIDEIRRRLGFLDDVGLGYLTLER
SADSLSGGEAQRIRLASQIGAGLVGVLYVLDEPSIGLHPRDHNRLLATLRRLRDMGNSVV
VVEHEEDSIRAADHLIDMGPGAGVHGGEVVATGTPKQVAANPASVTGAFLSGQRRIEIPH
RRRSPDFTEPLRIRAASGHNLNNLDIELPRGLLIGVTGVSGSGKSTLINDTLYRQAAKQL
NAAHTDPAAHAGIDGLEYFDKVVDIDQSPIGRTPRSNPATYTGLFGPIRELFAATPEARS
RGYKPGRFSFNVRGGRCEACQGEGVVRVEMHLLPDLYVACDACKGTRFNRETLEIRYRGY
TIHEVLEMSVEQAREFFEAVPTVRRKLDMLSEVGLDYLCLGQNATTLSGGEAQRVKLARE
LSRREHGRTLYILDEPTTGLHFADVEQLLGVLQQLCDNGNTVIVVEHDLDIIKCADWVID
LGPEGGAAGGNLVAAGTPEDIAEAEGSYTGQYLRQVLGKTYANLILEGD
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggactatatccgcatccgcggcgcacgaactcacaacctgcgcaacgtcgacgtcgac
atcccccgcaaccaactcgtagtcatcaccggcctctccggctcgggcaagtcatcactt
gccttcgacaccctctacgccgagggccagcgccgctatgtcgaatccctctcggcctac
gcccggcagtttctctctatgatggataagcccgacgttgaccatatcgaagggctgtca
ccggccatctcggtagagcagaaacgcgcctcgcacaacccccgctccacggtggcgaca
gtcaccgaaatccacgactacctgcgcctgctcttcgcccgcgtcggcactccgcactgc
cccgagcacggcatcgccctgcatgccagctcggtcagcgagatggtggacaggctgctg
gccgaaccgcagggcagcaagatgatgctgctcgccccgatcgagcaccccagcggcagc
gctcaacagacctgtgaacagctacgcgctcagggctttattcgtgcccgcatcgacgga
gtgatccgcgaactggagcagacaccccaagtaagtgccgatcaggatcaccagattgag
gcagtcatcgatcgttttcgtatccgcgatgacctcgccgggcgcctagccgattcgcta
gagaccgccctagccatcagtgacggcatagtgcgggcaggctggctagacgagcccgag
cgcgagccactgaccttctccacccgctactcctgcccgcagtgtggctacagcgtcgaa
ccccttgagccgcggatgttctcatttaataaccccaacggtgcctgcccgagctgtgac
gggcttggagtagagcaccatttcgatcccgccaaggtcgtcagccgcccgcaactcgcc
cctgccgagggcgccatccgcggctgggacaggcgcaacgcctactacttcaacctgctc
gaggggcttgccgagcactacggttttgacattaccaccccctgggagaacttaaccgac
gaagtccgcgaggtaatgctctacggctcaggagatgaggagattgaattccgctaccca
acccgtagcggcgaaaccgtccactgccacccattcgagggggttatacccaacctgcaa
cgccgttaccgggaagcagaatcggccactgtccgcgaagagcttggtcgttacatcagc
gaacgtctctgccgggagtgccagggcagccgccttaacgagcgcgcccgcaacgtcagc
gtcgctggctataaactagctgaactggccgcgctgcctatccatgaggctcaccagcgt
ttcggcaacctcgagctgaccggttcccgcgcgacaattgccgccccggtgatcgatgag
atccgccgccgtctcggcttcctcgacgatgtcgggctcggttacctgaccctggaacgt
tcggcggacagcctctccggcggcgaggcgcagcgcatccgcctagccagccagatcggc
gccggcttggtcggcgtactctacgtcctcgatgagccctcgattggcctccacccgcgc
gaccataaccggttgctggcgaccctgcggcgcctgcgcgatatgggcaacagcgtcgta
gtagtcgagcacgaagaggactcgatccgcgccgccgatcacctgatcgacatgggcccc
ggcgccggcgtccacggtggtgaggtggttgccaccggcaccccgaagcaagtcgccgcc
aatccggcatcggttaccggggcctttctcagcggtcagcgccgcatagagatcccccac
cgccgccgctcgcccgacttcacagagccgctacgcatccgtgctgctagcggccacaat
ctcaacaacctagatatcgaactgccgcgcggcctgctgatcggcgttaccggcgtctcg
ggctccggcaaatcgaccttgatcaacgacaccctctaccgccaggccgccaagcagctc
aatgctgcccacaccgaccctgctgcccatgcgggcattgatggcctagagtacttcgat
aaggtagttgatatcgaccagagccccattggacggaccccgcgctccaacccggcaacc
tataccggcctattcggcccgatccgcgaactcttcgccgccaccccagaggcccgctcc
cgtggctataagcccgggcgcttctcatttaacgtccgcggcgggcgctgcgaggcctgc
cagggcgaaggcgtggtgcgggtggagatgcacctgctgcccgatctctacgtcgcctgc
gacgcctgcaagggcacccgctttaaccgcgagacgctggagattcgctatcgcggctat
accatccatgaagtactcgagatgagcgttgagcaggcgcgcgagtttttcgaggccgtc
cccacagtccgccgcaagctcgacatgctcagcgaggtcggcctcgactacctttgcctc
ggccaaaacgccaccacactctccggcggcgaggcgcaacgggtcaaactagcccgcgag
ctctcgcgccgcgaacacggccgcaccctctatatcctggatgagccgaccaccgggctg
cactttgccgatgtcgagcagctgctcggtgtactccagcagctctgtgataacggcaac
acggtgatcgttgtcgaacacgatctcgatatcatcaaatgcgccgattgggtcatcgac
ctcggcccggaaggcggcgcagcgggtggcaacctggtagcggctggaacccccgaggat
attgctgaggcagagggctcctatactgggcagtacctccgccaagtactaggtaagaca
tacgcgaatctcatacttgagggcgattga
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