Halorhodospira halochloris: HH1059_25650
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Entry
HH1059_25650 CDS
T06158
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03030
DNA replication
hhk03410
Base excision repair
hhk03420
Nucleotide excision repair
hhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH1059_25650 (polA)
03410 Base excision repair
HH1059_25650 (polA)
03420 Nucleotide excision repair
HH1059_25650 (polA)
03440 Homologous recombination
HH1059_25650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhk03032
]
HH1059_25650 (polA)
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_25650 (polA)
Enzymes [BR:
hhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH1059_25650 (polA)
DNA replication proteins [BR:
hhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HH1059_25650 (polA)
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HH1059_25650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH1059_25650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
SCGB3A
Motif
Other DBs
NCBI-ProteinID:
BAU56648
UniProt:
A0A110B4S5
LinkDB
All DBs
Position
complement(2808022..2810790)
Genome browser
AA seq
922 aa
AA seq
DB search
MCVRDKKLVLVDGSSYLYRAYYALPQLSNSSGEPTGALYGVVNMLHKLLSEEADEHIAVV
FDAPGRTFRDDLFEQYKAHRPPMPDELRSQLNPLKEIISALGIPVVEVAGVEADDVIGTL
ARRSVGPVLISTGDKDMAQLVDERVTLLNTMTGRRLDPAGVEERFGVPPEAVRDYLALVG
DKSDNIPGIPKVGEKTAAKWLQEYGNIAALRENADEIKGKVGESLRAHLNELELSVNLAT
IRCDLDLDVSPPQLLRQSPDNSRLRELYRRYEMRRLLKELEPDSPEHNAKADMQQGPESA
GNQKHGVNQTSSEQDLSPDYQLVTDEQELDVWIASLKEAEAFAFDLETDSLSYMDAAIVG
FALAVKPHQAAYVPVAHDYDSTLGQLRQLSLDYVLARLRPLLEDDNQLKVGQNLKYDMSV
LARYGIDLRGVAYDTMLESYVLDSTATRHDMDSLAWKYLGVSTTTYEDLCGKGAKQKPFA
SIDVHKAKDYAAEDADITLRLHQKLLPRLKDKPSLFNVFSQLEMPLVPVLSRMERGGVKV
DQEMLGEQSKELAERMSEVESLAHSEAGEEFNLNSPRQIQEILFERMGLPVEHRTPKGQP
STAEAVLEELRHKGYELPRLILEHRGWAKLKSTYTDKLPRLIHPQTGRVHTSYHQAVAAT
GRLSSSDPNLQNIPIRSEAGRKIRQAFIAEPGYSLVTADYSQVELRIMAHLSADEGLQRA
FAAGEDIHRSTAAEVFGVEHPSDEQRRAAKAINFGLIYGMSAWGLGRQLNIERELAQLYI
DRYFERYPGVREFMAKTREQARERGYVETVFGRRLYLPEISSRNRQRREYAERTAINAPM
QGTAADIIKQAMIDVDAMLSDKYPGVHMVMQVHDELVLEIPQEQIEPVSKRVQKLMAAAD
QGALTVPLEVEIGVGRDWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtaagagataaaaaactagtcttggtagatggctcctcatatctctatcgagcc
tactatgcactgccacaactaagtaacagcagtggcgaacccacaggggcgctctacggt
gttgttaatatgctccacaagctgctcagtgaggaggctgatgaacatattgccgttgtc
ttcgacgctccagggcgcacctttcgcgatgatctattcgaacaatacaaagcacatcgg
ccgcccatgccggatgaactccgttctcagcttaatccccttaaggagataattagtgca
ttgggaatccctgttgtagaagttgctggcgttgaagctgacgatgtcattggcaccttg
gctaggcgctctgttggtccggttcttatctctacgggtgataaagacatggctcaactt
gttgatgagcgagtaaccttgctcaatacaatgactggcagaaggcttgaccctgcgggc
gttgaagagaggtttggcgtgccgcccgaggctgtgcgcgattacctagccctggtcggc
gacaagtcggacaatatacctggcattcccaaagttggtgagaagacggccgcgaagtgg
ctgcaagagtacggcaatattgctgcattgcgcgaaaatgccgacgaaatcaaaggcaag
gtaggcgagagtctgcgggctcaccttaatgagcttgagctatcggtcaatctggctact
attcgttgtgatctagatcttgatgtatcacctccccaactgctgcgccagtcccctgat
aattcgcgcttgagagaactctaccggcgctatgaaatgcgccggctgttaaaggagctg
gaacccgacagccctgagcataatgctaaagcggatatgcagcagggccccgagtctgcg
ggtaatcagaagcatggggttaaccaaacatcaagtgaacaagatttgtcgccagactat
cagcttgtcactgatgagcaggagttggacgtatggattgctagcctgaaagaagcagag
gcctttgcctttgatttggagaccgattcactctcctatatggatgcagcaatagtcggt
tttgctctggcagttaagccccaccaggcagcttatgtacctgtagcacatgattatgat
tcaacattgggacagctaaggcagctctctctcgattatgtattagcacgactgcggcct
ctgcttgaggacgataatcaacttaaggtcggccagaacctaaagtacgatatgagcgtt
ttggcccgctacggaatagatctgcgcggggttgcatacgacaccatgctcgaatcatat
gtgcttgactcaacggcaacccgccacgacatggactccctagcgtggaagtatcttggc
gtatcaacaacgacatacgaagacttgtgtgggaaaggggccaagcagaagccttttgcc
tcaattgatgtccacaaagcaaaggattatgccgcagaagatgcggatataacgctgcgc
ttgcaccaaaaactactgccgcgacttaaggataagccaagcctgtttaatgtcttttcg
caattagagatgccgcttgttccggtgctctcgcgcatggagagaggcggggtaaaggtt
gaccaggaaatgctcggcgagcaaagcaaagagctagctgagcgtatgtcggaggtcgag
tccttagctcacagcgaagctggagaagagtttaatctgaactcgccgcgacagattcaa
gagattcttttcgagcgcatgggcttgccggttgagcatcgcaccccgaaaggacagccc
tccacagccgaggctgtcttagaagagctccgccataagggctacgaattaccgcgtcta
atactcgagcaccgcggctgggcaaagctcaaatcgacctacacagataagctaccgcgc
ctgattcacccgcaaaccggcagggttcatacctcgtatcatcaggcggttgcggctaca
ggtagactatcctcatctgaccctaacctgcagaatattcccattcgtagtgaggcaggg
cgaaaaataagacaagccttcatagccgagccaggatactcgctggttacggccgattac
tcccaggtagagctgcgcataatggcgcatttatctgcggatgaaggcttgcagcgcgcg
tttgctgccggggaggatatccaccgtagcaccgctgctgaggtatttggggtggagcac
ccgagtgatgagcagcgccgcgcagcgaaggcaataaactttggcctgatctatggcatg
tcggcgtgggggctaggtcgtcaactgaatattgagcgtgaattggcacagctgtatatc
gaccgctattttgagcgctatcccggagtgcgtgaatttatggcaaagacccgcgagcag
gcacgcgagaggggatacgttgagacagtctttggccgtcgtctttatttgcctgaaatc
agcagtcgtaatcgccagcgccgcgaatatgcggagcgtaccgcaataaacgcacctatg
caggggactgcagcagatatcataaagcaggctatgatcgatgtggatgccatgctgagt
gataagtaccctggagtgcacatggtgatgcaggtacatgatgagctagtactagagata
ccgcaggaacagatagagccagttagcaaacgagtccagaagttgatggcggccgctgat
caaggcgccctaaccgtgccattggaggtcgagataggggttggtagagactgggatgag
gctcactga
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