Halorhodospira halochloris: HH1059_25670
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Entry
HH1059_25670 CDS
T06158
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03420
Nucleotide excision repair
hhk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH1059_25670 (uvrD)
03430 Mismatch repair
HH1059_25670 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_25670 (uvrD)
Enzymes [BR:
hhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH1059_25670 (uvrD)
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH1059_25670 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HH1059_25670 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Phage_Mu_Gp27
DUF488
Motif
Other DBs
NCBI-ProteinID:
BAU56650
UniProt:
A0A110B4E1
LinkDB
All DBs
Position
complement(2811830..2814028)
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AA seq
732 aa
AA seq
DB search
MDLDDLLSDLNDDQLRAVCVDAGRTLVLAGAGSGKTRVLTRRAAYLVAAQGASPFSILAV
TFTNKAAGEMRGRIGSLLGIATAGMWVGTFHGIAHRLLRQHADRADLPEGFQILDSDDQL
RMVKRILRSRGNDESNYPPRQVRNFISSRKDEGLRARDIESGNGDIADEMLAIYADYEQA
CQRAGMVDFGELLLRAYELLRFDQELLEHYRRRFQHILVDELQDTNSLQYRWLKLIAGPN
SEVFAVGDDDQSIYGWRGARVENIERYCREMGDVAVVRLEQNYRSTATILSAANDLIACN
ASRLGKNLWTQGASGEPITLYSAFNEVDEARWVVERIRAQIQEGDYHAGDFAILYRSNAQ
SRAFEEALVAQRIPYRVYGGLRFFERAEIKDALAYLRLTINRHDDSSFERAVATPPRGIG
AKTMEIVRSYARESAQSLWSATRDLIVTQSISGRARNALISFINLLDELEDRVKEQPLHH
QVEHAISSTGLRNHHSRDESRLENLDELVTAARSFVQQSDENIETDQHPLISFLTHAALE
AGEAQADDWQRSVQLMTLHAAKGLEFPVVFLAGMEEGLFPHYLSREDSARLEEERRLCYV
GMTRARQRLLLTHAQRRRLHGRDQMTSPSRFLSEIPDRYIELIRPHMRVSRNDGLRDSGD
TRQASVSPVSPKFSDEPPEGFSIGSRVRHSKFGEGVIMSSEGRGDNARLQVRFDGGDTKW
LVAGFAKLEVMN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatctggatgatctgctcagtgaccttaatgatgatcagctgcgtgctgtttgtgtt
gatgctgggagaaccctcgtgcttgccggtgcaggtagcggcaagacaagggtgctaacc
aggagggcagcgtacctggttgcggcccagggggcctcgcccttctcgattctagctgta
accttcaccaacaaggcggctggtgagatgcgggggcgcataggcagcctgcttggcata
gccacagctggcatgtgggttggaacgtttcatggtattgcccaccgcctgttgcgccag
cacgccgatcgagcagatcttccggaagggttccagattcttgattctgatgatcaactg
cgcatggtaaagcgcatattgcgtagccgtggcaatgacgaatcgaactatccgccgcgc
caggtacgcaactttattagcagtcgcaaagatgaggggctacgggcgcgtgatatagag
tccgggaatggcgatatagcggatgaaatgctcgctatttatgccgactatgagcaggca
tgccagcgtgcagggatggttgactttggggagctactgctgcgcgcctacgagttgcta
agattcgaccaggaactgctagaacactaccggagacgctttcaacatattcttgtcgat
gagttgcaggacaccaatagtctgcaatatcgctggctgaagctaattgccgggccaaac
tcagaggtctttgctgttggtgatgatgaccagtctatatatggttggcgcggagcgcgc
gttgagaatattgagcgttactgccgggagatgggcgatgtggcagttgtgcgcttggag
cagaactacaggtcgaccgcaactattctatcggcagcaaatgacttaatagcctgtaat
gcaagcaggcttggcaagaacctttggacccagggcgctagtggtgaaccgataacactt
tattcagccttcaatgaggtcgatgaagcacgctgggtagttgagcggatacgcgcgcag
attcaagaaggggactatcatgctggtgattttgccattctatatcgctccaacgcccaa
tcaagggcatttgaggaggcgttagtagctcaacgcataccttatcgagtctatggcggg
ttgcgcttctttgaacgcgccgagataaaggatgccctggcttacctgcgtcttactatc
aatcgccatgacgacagcagcttcgagcgggcggttgctaccccgccacgcggtattggt
gctaagactatggaaattgtgcgcagctacgcccgcgagagcgcacagagtttgtggtcg
gcaacgcgcgatttgattgttactcaaagcatctcgggcagggcgcgcaatgcactaatt
agtttcataaatctgctggatgaactggaagaccgggtcaaggaacaaccactgcatcac
caggttgagcatgctatatcctcaacaggactgcgcaatcaccacagcagagatgaaagc
cggctggagaatcttgatgagttggtgacagccgctcgcagctttgttcaacaaagcgat
gagaatatcgaaacagatcagcacccactgattagttttttgacccatgcagcactggag
gcgggagaagcacaagcggacgattggcagcgctctgtccaactgatgaccttgcatgct
gctaaaggactggagtttccggtcgtctttttagccggcatggaagaggggctgttcccg
cattatctttctagagaagactcagctcggctcgaggaagagcggcgtctgtgttatgtg
ggcatgacaagggcgcggcaaaggcttttattaacccatgcccagcgccgccgcttgcat
gggcgggatcagatgacgagtccgtcaagattcttgtccgagataccggatcgttatatc
gaattaatccggccgcatatgcgggttagccgaaatgatggactgcgtgatagtggtgat
acacgtcaggctagcgtttcacccgtttcaccaaaatttagcgatgagccaccagagggg
tttagtatagggagtagagttcgccactcgaagtttggcgagggagtgataatgtccagc
gaagggcgaggcgataacgctcgcctgcaggttagatttgatgggggggacacgaagtgg
ctggttgctgggttcgccaagctcgaggttatgaactaa
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