KEGG   Halobacteroides halobius: Halha_0625
Entry
Halha_0625        CDS       T02401                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hhl  Halobacteroides halobius
Pathway
hhl02024  Quorum sensing
hhl03060  Protein export
hhl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Halha_0625
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Halha_0625
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Halha_0625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhl02044]
    Halha_0625
Enzymes [BR:hhl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Halha_0625
Secretion system [BR:hhl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Halha_0625
  Eukaryotic Sec-SRP protein
   Halha_0625
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_17 AAA_22 APS_kinase AAA_18 cobW CbiA AAA_33 AAA_30 AAA_31 MeaB nSTAND3 AAA_14 AAA_16 YqeC AAA NTPase_1 TAFH TsaE MMR_HSR1 Thymidylate_kin ATP_bind_1 VirC1 AAA_24 MobB HTH_Crp_2 ArsA_ATPase NPHP3_N 6PF2K SLFN-g3_helicase PBS_linker_poly ABC_tran ResIII
Other DBs
NCBI-ProteinID: AGB40598
UniProt: L0K8Z9
LinkDB
Position
612094..613437
AA seq 447 aa
MIFEGLSEKLQNAFDKLKGKGKLSEDDVKAALREVKLALLEADVNYKVVKGFISKIEERA
VGHEVLDSLTPAQQVIKIVNEELTDLMGGTQSKISFASNPPTVIMMAGLQGAGKTTTVGK
LAKQLKNQGKNPLLVAGDIYRPAAIKQLQVLGDRLDQPVFSMGDKQSPVDIAKAAINNAE
SNGHDVVIIDTAGRLHIDEELMDELKQIKSEVIPHEILLVVDAMTGQDAVNVAEEFDDAL
GVDGVVLTKLDGDARGGAALSISSVTGKPIKFVGTGEKLDNLEPFHPDRMSSRILGMGDV
LSLIEKAEEQMDEERAKELEQKLREKKFTLEDFLDQLEQVRNMGPLDEILGMIPGAGKQL
KNLNMDEKQLDYIEAIINSMTIEERRNPEIINGSRRRRIAAGSGTSVQQVNRLLKQFKQT
KKMMDQLGDAQKGMAGKLKGKMNLPFF
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgatctttgaagggttatctgaaaaattacaaaatgcttttgataaattaaaaggaaaa
ggtaagttatccgaagatgatgttaaagctgctttaagagaagtaaagttagctttatta
gaggcagatgtaaattataaagttgttaagggttttattagtaaaattgaagagcgggca
gttggtcatgaagtattagatagtctaacccctgctcaacaagttattaagatagttaat
gaagaattaacagatttaatgggaggaacgcaaagtaaaatcagttttgcttctaatccg
cctacagtaataatgatggcaggattacaaggtgctggtaaaacgactactgttggtaaa
ttggctaaacagcttaagaaccaagggaagaaccctttattagtagctggagatatttat
aggccggctgctattaagcaattacaggtattaggtgatcggttagatcaacccgtattt
agtatgggtgataaacaaagtcctgttgatattgctaaagctgctattaataatgcagag
tcaaatggtcatgatgtagtaattatagatactgctggtcgattgcatattgatgaagag
ttaatggatgagcttaagcaaattaaaagtgaagtaattccacatgagattttattagtt
gttgatgctatgactggtcaagatgctgtgaatgtagcagaagaatttgatgatgcccta
ggagtagatggtgttgttttaactaagctagatggtgatgctcgtggtggtgcagcttta
tctattagttcagtaactggcaaaccaattaaatttgttggtaccggagaaaagctggat
aatctagaacctttccatccagatagaatgtcttctcgtatcttaggtatgggagatgtt
ttaagcttaattgaaaaggccgaagaacagatggatgaggaaagggccaaagaattagaa
caaaaactacgtgagaaaaagttcactctagaagattttttagaccagttagaacaggtt
cgaaatatgggaccacttgatgaaatattaggtatgattcctggtgcaggaaaacagcta
aaaaatcttaatatggatgaaaaacaattagattacattgaagcaataattaattctatg
acaatagaggaacgtcgtaatccagagataattaatggaagtcggcgacgtagaattgct
gcaggtagtggaacttcagtgcaacaagttaatcgcttattaaagcaatttaaacagacg
aaaaaaatgatggaccagctaggagatgctcaaaaaggaatggcaggtaaattgaaagga
aagatgaacttgcctttcttttag

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