Halobacteroides halobius: Halha_0645
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Entry
Halha_0645 CDS
T02401
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhl
Halobacteroides halobius
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhl03032
]
Halha_0645
03400 DNA repair and recombination proteins [BR:
hhl03400
]
Halha_0645
Enzymes [BR:
hhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Halha_0645
DNA replication proteins [BR:
hhl03032
]
Prokaryotic type
DNA Topoisomerases
Halha_0645
DNA repair and recombination proteins [BR:
hhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halha_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_3
Zn_ribbon_GRF
Zn_ribbon_recom
Toprim_2
dCache_1_like
Glutaredoxin
HypA
Motif
Other DBs
NCBI-ProteinID:
AGB40618
UniProt:
L0K918
LinkDB
All DBs
Position
625476..627542
Genome browser
AA seq
688 aa
AA seq
DB search
MAKDKNLVIVESPAKAKTISKFLGSDFTVEASMGHVIDLPKSQLGVDVENNFEPKYITIR
GKGKTLQKLKRKAKKSKEVLLATDPDREGEAISWHLARALKMDEESDCRIEFNEITKSAV
QDALEEPRRIDQDRVDAQQARRVLDRLVGYKLSPLLWKKVKKGLSAGRVQSVAVRIICER
EEEIKAFEPQEYWTLDTKLKDKNKGQFKAKLYRINNKKFALGSKQETDQVISELKEEDLK
VSKIKEGKRRRNPSPPFTTSSLQQQASNYLHFSTKKTMYLAQQLYEGIDLGAEGTVGLIT
YMRTDSTRISKEAQANTRDYIADNLGDKYLPDTPKKYKAKSGAQDAHEAIRPTSVFKTPQ
KVKQYLGKQQYKLYKLIWERFVASQMKPAVYKTLRVNIKGEKYWLRANGSQQVFPGFLKV
DTSKQQKKDKELPSLEEGAKIDIVELLPDQHFTKPPARYSEAKLVKTLEKKGIGRPSTYA
AIVGTIEKRGYVTKENKRFKPTELGEIVNGLLVEHFPNVTNVKFTAQLEADLDRIEAGKN
DWIEVLKSFYSPFSDRLEEAKENMEQVQLEEKETDVICEKCGNNMVIKHGRYGKFLACPG
FPDCKNTKPLLDKVGVKCPECKDGDVVKRKSKKGRTFYGCSNYPDCEFMTWHQPVEKKCP
ECGKFLVEKRTKKETKRYCINSDCDYEE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagataagaatctagtgattgtagaatcacctgctaaagcaaaaacaattagc
aaatttttgggttcagattttactgtagaagcatcaatggggcatgtcatagacttaccc
aaaagtcaattaggtgttgatgtagaaaataattttgagcctaaatatattactattcga
ggaaaagggaaaacattacaaaaattaaagagaaaagctaaaaagagtaaggaagtatta
ttagcaactgaccctgatcgagaaggggaggctatttcttggcatttggcccgtgcttta
aagatggatgaagagagtgattgtcgcatagaatttaatgagattactaaatcagcagta
caagatgctttagaagaaccacgaaggattgatcaagatagggtagatgctcaacaagca
agaagggttttagataggttagtgggatataaattaagtcctttattatggaagaaagta
aagaagggtttaagtgctggtcgagttcaatctgttgctgttagaattatttgtgagaga
gaagaagaaattaaagcatttgaaccacaagaatattggactttagatactaaacttaaa
gataagaacaaaggtcaatttaaagctaaattatatagaattaataataaaaaatttgca
ttaggtagtaaacaagagacagaccaggtgatttcagaactaaaagaagaagatttaaaa
gtttctaagattaaggaagggaagagaagaaggaacccatcacctccatttactactagt
agtcttcagcaacaagcctctaattatctacactttagtacaaaaaagacaatgtattta
gctcaacaactttatgaaggaattgatttaggcgctgaaggaacagtaggtttaatcacc
tatatgcgaactgattctactagaatttctaaggaagctcaagccaatactagagattat
atagctgataatttaggagataaatatctgcctgatactcctaaaaagtataaggctaaa
tctggagcacaagatgctcacgaggcaattagaccaacatctgtatttaaaactccccaa
aaagtgaaacagtatttaggtaaacagcaatataaattgtataagttaatttgggagcgg
tttgttgctagtcaaatgaaacctgctgtatataaaaccttacgagttaatattaaagga
gaaaaatactggttaagggccaatggctctcaacaagttttccctggctttttaaaagtt
gatacgagtaaacagcaaaagaaagataaagagctacctagtcttgaagaaggagcgaag
attgatatagttgaactactccctgaccaacactttactaaacctcctgctagatatagt
gaagctaaattagttaaaactttagaaaaaaagggaattgggcgtcctagtacttatgcg
gctatagttgggacaatagaaaagagaggttatgtaacgaaagaaaataagcgttttaaa
cctactgaattaggagagatagttaatggattattagtagaacatttccctaatgtaact
aatgttaagtttactgctcaattagaagctgatttagatagaattgaagcaggtaaaaat
gattggattgaggtattaaaaagcttttatagtcctttttctgatcgtctagaagaagct
aaggagaatatggaacaagtacaattagaagaaaaggaaacagatgttatttgtgaaaaa
tgtggtaataatatggtgatcaaacatggtcgctatggtaagtttttagcttgccctggt
tttcctgattgtaagaatacaaaacctttattagataaagtaggagtaaagtgtcctgag
tgtaaagatggagatgtagtaaaaagaaagagcaaaaagggtagaactttttatggatgt
agtaattatccagattgtgagtttatgacatggcatcaacctgtagaaaagaaatgtcct
gaatgtggaaaatttttagtagaaaaacgaaccaagaaagaaactaagcggtattgtatt
aattcagattgtgattatgaagaataa
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