Halobacteroides halobius: Halha_0708
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Entry
Halha_0708 CDS
T02401
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hhl
Halobacteroides halobius
Pathway
hhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Halha_0708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhl03019
]
Halha_0708
03016 Transfer RNA biogenesis [BR:
hhl03016
]
Halha_0708
Enzymes [BR:
hhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Halha_0708
Messenger RNA biogenesis [BR:
hhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Halha_0708
Transfer RNA biogenesis [BR:
hhl03016
]
Prokaryotic type
tRNA degradation factors
Halha_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
Par3_HAL_N_term
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AGB40681
UniProt:
L0K6M7
LinkDB
All DBs
Position
683235..685352
Genome browser
AA seq
705 aa
AA seq
DB search
MAQKWSMELGGSNLTIETGELAQQANGSVLVRYGDTVVLVTATMSDPRPGINYFPLMVNY
EERLYAVGKIPGGFIKREGRPSDAATLTARLIDRPLRPLFPEGFRHDVQVVATVLSVDSD
NAPDIAAMIGASAALAISDIPFEAPIGGVRVGLVDGEYMINPTIAQMKETKIDLTVAGTE
EAVMMVEAGANEATEEEVIEAIEFGHQTIKEIVKLEKEMVAEIGKEKADVELEIIDRPEI
EEEVKDYVGDDLKEALQTKVKAKRSKQISAVKEDTKKYFADKYDDAEDLDEIKEVVSNTL
DKIIKNVIRSLVIEEGTRIDGRDLDEVRPIWSKVDLLPRAHGSGVFTRGQTQAMTVATLG
AVGDEQVLDGLEEKESKRYMHHYNFPPYSVGETNPLRSPGRREIGHGTLGERALRPMIPN
SDEFPYTLRLVSEVLSSNGSTSQASICGSTLALMDAGVPIKAPVSGIAMGLIKADDEVAI
LTDIQGIEDHNGDMDFKVAGTKDGITALQLDIKIKGISKEILARGLEQARKGRLHILDKM
LETIDQPRTEKSEYAPAIMTLKIDEDKIKDVIGKGGKTIKGIIDETGVKIDIEDDGTIYI
AAEDQASGKEARKIIENLTKEIEVGQYHMGTVKRTTDFGAFVEIVPGKEGLLHISELADR
HVKKVENIVKKDDELLVKVIDIDDRGRISLSRKQALEEQEERENN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaaatggtcaatggagcttggcggttccaatttaacaattgaaacaggagaa
ttggctcaacaagctaatgggtcagttttagtacgttatggtgataccgtagtattagtt
acggcaactatgtctgatccaagacctggaattaattattttcctttaatggttaactat
gaagaaagattatatgctgtaggaaagattccaggaggttttattaaacgagagggtaga
ccgagtgatgcggcaacattaactgcaagattgattgatcgtccgttacgtcctttattt
ccagaaggatttagacatgatgttcaggtagtagctactgttttatcagttgattcagat
aatgctccagatattgcagctatgattggagcttctgctgcgttagcaatctctgatatt
ccatttgaagcaccaattggtggggttagagtaggtttggttgatggagaatatatgatt
aatcctactatagcacaaatgaaagaaactaagattgatttaacggttgcaggaactgaa
gaggcagttatgatggtagaagctggtgctaatgaagcaacagaagaggaagtaattgaa
gctattgaatttgggcatcaaacaatcaaggaaattgttaaattagaaaaagaaatggta
gctgaaatcggaaaagaaaaagctgatgttgaattagagattatagatcgaccagaaatt
gaagaagaagtcaaagactatgttggagatgatttaaaagaagctttacaaactaaagtt
aaagctaaaagaagtaagcaaattagtgcggttaaagaagataccaaaaaatactttgct
gacaaatatgatgatgcagaagatttagatgaaattaaagaggtagtcagtaatacatta
gataagattataaagaatgtaattagaagcttggttattgaagaaggtactcgaattgat
ggacgagatttagatgaggtgcgtccaatttggagtaaagttgatctattacctcgagct
catgggtctggagtctttactcggggccaaactcaagcaatgacagtagctactttaggt
gctgtaggggatgagcaagttttagatgggttagaagaaaaagaatctaaacgatatatg
catcattataattttcctccttatagtgtaggggagactaatccattacgctcaccaggc
agaagagaaattggacatggtactttaggagagagggctttaaggccaatgattccaaat
agtgatgaattcccatatacacttagattagtttctgaagtattatcttctaatggttct
acttcacaggctagtatttgtggaagtactttagctttaatggatgcaggagttccaatt
aaggctccagtatcaggaattgctatgggactaattaaagcagatgatgaagttgctatt
ttaactgatatccaaggaatagaagatcacaatggtgatatggactttaaagtagcagga
actaaagatggaattactgctttacaattagatattaaaatcaaaggtatttctaaggaa
atattagccagaggtttagagcaagctagaaaaggtagacttcatattttagataaaatg
ttagagacaatagaccaacctagaactgaaaaatctgaatatgctcctgcaattatgact
ttaaagattgatgaagataagattaaagatgtaattggaaaaggtggtaagacgattaag
ggaattattgatgaaacaggagttaagattgatatagaagatgatggaactatctatata
gccgctgaagatcaggcaagcggtaaagaagctagaaagataattgagaatttaacaaaa
gaaattgaagtagggcaatatcatatggggacagtaaaacgaactactgattttggagct
tttgtagaaatcgtccctggaaaagaaggtttacttcatatttctgaattagctgaccga
catgttaagaaagtagagaatattgttaaaaaagatgatgagttgttagttaaagtaatt
gatattgatgatcgaggtagaattagtttatcccgtaagcaagcgttagaagagcaagaa
gagcgtgagaataattaa
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