Halobacteroides halobius: Halha_0880
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Entry
Halha_0880 CDS
T02401
Name
(GenBank) primosomal protein N''
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hhl
Halobacteroides halobius
Pathway
hhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Halha_0880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhl03400
]
Halha_0880
Enzymes [BR:
hhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halha_0880
DNA repair and recombination proteins [BR:
hhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halha_0880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
ARM_LIN_2nd
AAA_19
ATPase_2
TrwB_AAD_bind
zf-H2C2_5
PIF1
Zn_ribbon_6
T2SSE
zf-C2H2_ZFHX3
Motif
Other DBs
NCBI-ProteinID:
AGB40846
UniProt:
L0K773
LinkDB
All DBs
Position
861320..863545
Genome browser
AA seq
741 aa
AA seq
DB search
MKYVSIIVDLPVKQVNQTFSYHIPEKLEETIGLGKKVIVPFGPRKIEGYIVEIKKQVEFE
TKPIIKVASDYSLFDQELLELAEWMANYYQCYLISALKAIIPSGKQRVKTKRVVNLAQSD
QETNEIISQLEKRAPKQAAVLFYLVKNPAQQLITTNLAKKVNTSSGTIRRLFKKGLIDYN
KEEVKRIPYQDTNFKKTTPLAPTPEQEVALSEIKAAINSQLDTTFLLKGVTGSGKTEVYL
QSISEVLSQGQEAIVLIPEIALTPQTIARFKGRFGKQVAVLHSQLSSGERFDEWRRIKEG
KAKIAVGARSAIFAPFSNLGLIVIDEEHETTYKQEDHPKYHAREVAVKRAKLNQAVTILG
TATPSLESYYRAQKEEYKLLELSKRIEDRPLPKVELVDMRQELEAGNKQMLSRSLEKEIK
ARLEVDEQVIIFLNRRGFSTFVQCRKCGYVMECDECDVSLTYFSQSQILKCNYCDFTTKI
PEECPDCGSSYIKYFGVGTEKVERALQEIFPEANIARMDRDTTTKKGAYQRILSSFSAGE
IDILVGTQMIAKGHDYPNVTLVGVITADTALNLPDFRASERTFQLLAQVAGRTGRGAKAG
QVIIQSYTPEHYSIQQAKEHDYQSFYEQEIIFREEMEYPPVTHLINIIVSDKSEDKTIKV
AQRLGEIINAKLKDTADKQLLGPVQAPLSKIRGEYRWQLLLKGRNLEELRQLNQMSLQEL
EEVKELKSVKISIDIDPIGVL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgtatctattatagttgatttaccagttaaacaagtcaatcaaacctttagt
tatcatataccagaaaaattagaggaaacaataggattaggcaagaaagtaattgtacct
tttggcccgcgcaaaattgaaggatatatagtagagattaagaaacaagttgaatttgag
accaaaccaattattaaggtagcaagtgattattcattatttgatcaagaattactagaa
ctagcagagtggatggctaactattatcaatgttatttgatttctgctttaaaggcaatt
attcctagtgggaagcagcgggttaagactaaacgagttgttaacttggcccaatcagat
caagagacgaatgagattatctctcagttagaaaagagggctcctaaacaagcagcagtt
ctattttatttagtaaaaaatccagcccaacaattaattactactaatttagctaaaaaa
gtgaatactagttctggtaccataaggagattatttaaaaaaggtctaatagattataat
aaagaagaagtaaagagaattccttaccaagatactaattttaaaaagacaactccttta
gctcctacgccagaacaagaagtagcactatctgaaattaaagcagctattaatagtcaa
ttagatacaacttttttattaaaaggagttactggtagtggaaagactgaggtatattta
caatcaatttctgaggttcttagccaaggccaagaggcaattgtcttaatccccgagatt
gctttaacccctcaaactattgcccgctttaaaggacgttttggaaagcaagtagctgtt
ttacatagtcaattatcttctggggaacgatttgatgaatggcggaggattaaagaggga
aaggctaagattgctgttggagctcgttcagcaatttttgctccttttagtaatttaggc
ttaattgttattgatgaagaacatgaaacaacttataaacaagaagatcatcctaagtat
catgctcgggaagtagcagttaaaagggccaagctaaatcaagcagtaactattttagga
actgcaactccttctttagaatcttattatcgggctcaaaaggaagagtacaaactattg
gagttatctaaacgaattgaagatcgtcctttaccaaaagtagaattagttgatatgcgc
caagagttagaggctggtaataaacagatgttaagtcgcagcttagaaaaggaaataaaa
gcaagattagaggtagatgaacaggtgattatctttcttaatcgacgtggtttttctaca
tttgtgcagtgtaggaagtgtggttatgtgatggaatgtgatgaatgtgatgtttcacta
acttatttttctcaatctcagattcttaagtgtaattattgtgattttacaacaaagatt
ccagaagaatgtcctgattgtggaagtagttatattaaatactttggagtaggaactgaa
aaagtagaacgagctttacaggaaatatttcctgaggctaatatagctcggatggatcga
gatacaacgactaaaaaaggggcttatcagcgaattctaagctcgttttcagctggggaa
atagatattttagtaggaactcagatgattgctaaaggacacgattatcctaatgttact
ttagtcggggttattactgctgatactgctttaaatctacctgattttagggcaagtgag
aggacatttcagctgttagctcaagtagctggtcggactggtcgaggagcaaaagcaggg
caagtaataattcaaagttatacccctgaacactacagtattcaacaagctaaagaacat
gattaccaaagtttttatgaacaagaaattatctttagagaagaaatggagtatcctcct
gtgacccatttaatcaatattattgtaagtgataaatcagaggacaaaacaattaaggta
gctcaaagattaggggagattattaatgctaagttaaaagatacagcagataagcagttg
cttggccccgtacaagctccattatctaaaatcagaggagaatatagatggcagttatta
cttaaaggacgaaatttagaagagttaagacagcttaatcaaatgtctttgcaggagtta
gaagaagttaaagagcttaaaagtgttaaaattagtattgatatagacccaataggagtg
ctataa
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