KEGG   Halobacteroides halobius: Halha_0957
Entry
Halha_0957        CDS       T02401                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hhl  Halobacteroides halobius
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hhl02048]
    Halha_0957
Enzymes [BR:hhl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Halha_0957
Prokaryotic defense system [BR:hhl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Halha_0957
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C Cas3_HD Helicase_C_2
Other DBs
NCBI-ProteinID: AGB40918
UniProt: L0K9Y8
LinkDB
Position
939971..942313
AA seq 780 aa
MIDITKYYSKIKEGFEPFKYQREVAEAILNGENVILQAPTGAGKTLASTMPYIIANEEGM
NFPKKLIYSTPRRTLVNSLYSDILDEIKKGDFTKEYDVTIQTGEKKEDRYFNGDIIFTTF
DQSLSSALSMPISLSNRLGNINVGAFLSSYLIFDEFHLFDLSGSYTTTVLLLEKLKDKVP
FCVMTATISEEKINALADKLDARVIRADSSEYLADIVTQQGKERRIFTKDNSLDAEEIVK
LHNQIEGQSKKSIVMCNRVENAQQIYEDINKLVNKEDGIETLLIHSRFLDEDRKRKEKQI
KKLFAKDNDDSNVILVSTQVIEVGIDITSDIMHTEISAIDSFLQRIGRCARYRNQTGKVY
VYDVLNEGDNKYLPYDDEVTLKTFSALQEIDGEVLTSELSQQIIDRVYSEETDVDAVANE
KVDCSSDEFIKESWKLPDKDRFNNLIRNVIACSIVISPWVYDNCSPYNYQSLSISPGTLR
SKVAEIAKETDDWLVKKVIERDDDSDFKYTYGETTADEIYPNNLYILNPDYFGYNLETGL
VFDGTGKKFDPLPISNQEPDYDNTYKEESYLQHIESMNKEVPELEREMSYAIELIKDEFD
LSADDFRDIVEFTIWAHDLGKLQEEWQLAHKRDEYDFIAHAERKSKPPSHAAESFWIVLE
LLEDFIFDYLENEGKIVDIIGKAMISHHSLNLNRTDKYTISTTVKKHLLNINADFFTEKD
LTQFINKRADRLLLSLSVGEDISDEIRVRSINQYLFYFVLVRILRLADQRATKKLNQDNI
NT seq 2343 nt   +upstreamnt  +downstreamnt
atcatagatattactaaatattattcaaaaattaaagaggggtttgagccttttaaatat
cagagagaagttgctgaagcaatattaaatggagaaaatgttatcttgcaggctccaact
ggggcaggaaagaccttagcttcgactatgccttatataattgctaatgaagaaggtatg
aattttcctaaaaaattgatttattctactccgagaagaactttagtgaatagtttatat
tctgatattttagatgagattaaaaaaggtgattttactaaagagtatgatgttacaatt
caaacgggagagaaaaaagaagatagatattttaatggggatattatttttactactttt
gatcaaagtttatcgtcagctctaagtatgccaatatcattatcaaacagattagggaat
atcaatgtaggagcatttctatcttcctatttaatctttgatgagtttcacctctttgat
ttaagtggatcttatactacaactgtattgttattagaaaagctaaaagataaagtccct
ttctgcgttatgacagctactatctcagaagaaaaaataaatgctttagctgataagtta
gatgctagagtaattagagcagatagttcagaatatttagcagatatagttactcaacaa
ggtaaggaacgaagaatttttactaaagataattctttagatgctgaagaaatagttaaa
ctgcataatcaaatcgagggccaatctaaaaagagtattgtaatgtgtaatcgagtagag
aatgctcaacaaatatacgaagatataaataaattagttaataaggaagatggaatagag
acgttacttattcactcgagatttttagatgaagaccgaaagagaaaagaaaagcagata
aagaaattatttgctaaagataatgatgatagcaatgtaattttagtaagtactcaagtt
attgaggttggaatagacattacttctgatattatgcatactgaaatttctgctatagat
tcttttttacaacggattggaagatgtgctagatatcgtaatcaaactggaaaggtatat
gtttacgatgtgttaaatgaaggagataataaatatttaccttatgatgatgaggttaca
ttaaagacattttcagctttacaggaaattgatggagaagtattaacctctgaactttcc
caacaaataattgatagagtttatagtgaagaaacagatgttgatgctgtagctaatgaa
aaggtagactgtagttctgatgaatttattaaagagagttggaaacttcctgataaagat
aggtttaataatttaatcagaaatgtaattgcctgtagcatagtaatttctccttgggta
tatgataattgttctccttataactatcagagtttaagtatttcacctgggacattacga
agtaaagtagcagaaatagctaaagaaactgatgattggttagtaaaaaaagtaatagaa
cgtgatgatgatagtgattttaaatatacttatggagaaacaaccgctgatgagatttat
cctaataatctttatattttaaatccagattactttggatataatttagaaactggttta
gtttttgatggcacaggtaaaaagtttgacccattgcctatatcaaatcaagaacctgat
tatgataatacttataaagaagaaagttatttgcagcatattgaaagtatgaacaaggaa
gtaccagaattagaaagagaaatgagttatgcaattgaattgattaaggatgaatttgat
ttgagtgctgatgattttagagatatagtggagtttactatttgggcccatgatttgggt
aagttgcaagaggaatggcagttggcccataaaagagatgaatatgattttatagcccat
gcggaaagaaaaagcaaaccgccaagccatgcagcagagagtttttggattgtattagaa
ttattagaagattttatttttgattacttagagaatgaaggaaaaatagttgatattatt
ggtaaagctatgatttcacatcattctttaaacttaaatagaactgataagtatactatt
tctacaactgttaaaaaacatttattaaatataaatgctgactttttcacagagaaagat
ttaacacaatttataaataaaagagcagatagattgcttttaagtttatcagttggagag
gatatttcagatgaaataagagtaagaagtattaatcaatatttattctattttgtctta
gttaggatcttaagattagctgatcaacgagcaactaaaaagttaaatcaagacaatatt
tag

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