Halobacteroides halobius: Halha_0978
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Entry
Halha_0978 CDS
T02401
Name
(GenBank) (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
hhl
Halobacteroides halobius
Pathway
hhl00900
Terpenoid backbone biosynthesis
hhl01100
Metabolic pathways
hhl01110
Biosynthesis of secondary metabolites
hhl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Halha_0978
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Halha_0978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hhl03011
]
Halha_0978
Enzymes [BR:
hhl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Halha_0978
Ribosome [BR:
hhl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Halha_0978
Bacteria
Halha_0978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
S1_2
Spt6_S1
DUF2110
SLT_4
SAM_KSR1
Motif
Other DBs
NCBI-ProteinID:
AGB40939
UniProt:
L0K9A8
LinkDB
All DBs
Position
963895..965955
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AA seq
686 aa
AA seq
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MFGSVNLEGVEVMEIKVGERAGFCFGVDRAMDFALKEGKESKNSVHTLGPLIHNPQAVDK
LKKADIKVIDQIDKVDDGTIIIRSHGVRPSIIEEAEDKDLDIINATCPFVQRVQEKAKQL
YKDGYQVLISGDKDHPEVIGILGHTDNQAIVVEELSDCKEVKLKSKVGVVAQTTQSLNKL
KKLVDYLLPQISDLKVHNTICTTTGQRQDEAARLAQDMDLMIVIGGYNSANTNRLAEICR
ENGAITHHIEQADELQVDWFSNIKKIGVTAGASTPNWIIKEVVSRMAEIKQDVEEKETTE
ESTTLTVGERVTGTIAQLTEDGAYIDIGAKTEGFIPNNEISSQRVASSEILSEGEEVEVE
IVNPEGEDGHPILSKRKVDEEAAWAKVKEAYENEEIITAKVDREVKGGLVVNIGLRGFIP
ASHVAVDYVEDLSQFVGQELELKVIEVEEENNNVVLSRKAILEEELSKKKEEILNSLNKG
DIVEGKVTKLVDFGAFVDLGGVEGLLHISEISWQRIEHPSKVLEEGQEIEVKVLEVNPTE
ERIALGYKQTQPDPWEQFDNKYDEGDKVTGKITKTVDFGAFMEVEPGVEGLIHISQLSHE
HVANVEDVVTAGDEVEAEILNIDINERRVGLSIKELESAPASQGQPARQPKSRPNKRNNN
RQQDKEKKNGTTIGDLVGDDLEDLFS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtagtgttaatttggagggagtagaagtaatggagatcaaagtaggggaacgt
gctggtttttgctttggagttgaccgagcaatggattttgctctaaaagaaggcaaagaa
agcaaaaattcagttcatactttagggcctttaatacataatccacaagcagttgacaaa
ttaaaaaaagcagatattaaagtaatagatcagattgataaagtagatgatggaactata
ataattcgttctcatggagtaagaccaagtattatagaagaggcagaggataaagactta
gatatcattaatgctacctgcccttttgtacaacgagtacaagaaaaggctaaacaatta
tataaagatggttatcaggttttaatcagtggagataaagatcatccagaagtgattggt
attttaggacatactgataaccaagcaatagtagttgaagaattatcagattgtaaagaa
gttaaattaaaaagtaaagtgggggttgttgctcaaacaactcaatctcttaataaactt
aaaaaactagttgactacttattaccacagatatcagatttaaaggtgcacaatactatt
tgtactactacaggtcagcgtcaagatgaagcagctagattggcccaagatatggatcta
atgatagtgattggtggatataatagtgccaataccaatcgcttagcagaaatctgtcgt
gaaaatggtgctataactcatcatattgagcaagcagatgaattgcaagtagattggttt
tctaatattaaaaagattggtgtaacagcaggggcatcgacccctaactggataattaag
gaggttgttagtcgaatggcagaaataaagcaagatgtagaagaaaaagaaactacagag
gaaagtactacactaacagtaggtgaaagagtaactggaacgattgctcaattaactgag
gatggtgcctatatagatataggtgctaagacggaaggatttattcctaataatgaaata
agttctcaacgagtagcttcttctgagattcttagtgaaggagaagaagttgaagttgaa
atagtaaatcctgaaggtgaagatggacatcctattttatctaaaagaaaagtagatgaa
gaagctgcttgggccaaagtaaaagaagcttatgaaaatgaagaaattattacagctaag
gtagatagagaagtaaaaggtggattagttgttaatattggtttaagaggatttattcct
gcttctcatgtagcagtcgattatgtagaagatttaagtcaatttgtaggtcaagagtta
gaacttaaagtaattgaagttgaagaagaaaataataatgtagttctttctcgaaaagct
atattagaagaagaacttagtaagaaaaaagaagaaattttaaattctcttaataaggga
gatatagtagaaggtaaagttactaaattagtagattttggtgcttttgttgatttaggt
ggtgtggaaggtttattacacatttcagaaatttcttggcagcgtattgaacatccttct
aaggttttagaagagggccaagagattgaagttaaagtattagaagttaatcctacagaa
gaaagaattgctttaggttataaacagactcagccagatccttgggagcaatttgataat
aagtatgatgagggagataaggtcacaggaaagattactaagacagttgactttggagct
tttatggaagttgagccaggagttgaaggattaattcatatttctcaattgtctcatgag
catgtagctaatgtagaagatgtagttacagcaggagatgaagtagaagcagaaatcctt
aatattgatattaatgaaagaagagttggtctaagtatcaaggagttagaatctgctccg
gctagtcaaggtcaaccagcgcgtcaacctaaatctagacctaataaaagaaataataat
agacaacaagataaagagaaaaagaatggaactactattggagatttagttggagatgat
ttagaggatttatttagttaa
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