Halobacteroides halobius: Halha_1198
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Entry
Halha_1198 CDS
T02401
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhl
Halobacteroides halobius
Pathway
hhl03420
Nucleotide excision repair
hhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halha_1198
03430 Mismatch repair
Halha_1198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhl03400
]
Halha_1198
Enzymes [BR:
hhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halha_1198
DNA repair and recombination proteins [BR:
hhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halha_1198
MMR (mismatch excision repair)
Other MMR factors
Halha_1198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DEAD
SAM_Exu
5_3_exonuc
AAA_11
GpA_ATPase
GH-E
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AGB41146
UniProt:
L0K7Z7
LinkDB
All DBs
Position
1207802..1209790
Genome browser
AA seq
662 aa
AA seq
DB search
MDLTVALNERQRQAVETTEGAVLVLAGAGSGKTRALTYRIAYLIEQGVDPYNILTLTFTN
KAAEDMEQKVKKLIGDQISNMYLGTFHSVCVRILSQNLEPLGYESGFVIYDQSETKALVS
DIIVTFDLDKEKYDPQSICRIINKAKQNLWTTEELIDYYEDTDFYQNIAEIYVKYNEALQ
DNNAFDFNDLIGKTIELFEENEEILEKYQERFKYVLIDEYQDTSPVQYQLARMLSRKHNN
IFAVGDDYQSIYKFRGADMSNILDFSTDFADCKVIKLERNYRCKANIIEASNAVIEHNYN
QSDKQAWTDNEPGEPIVIAEASDEYGEADYIVDEINNLVRFTGYDYSDIAILYRSNHQSR
VLEEAFVKQRIPYYIVGGLGFYDRKEIKDIISYLKVAVNPQDTVALKRIVNTPKRGLGPR
TIDKLINHAQEHVPEFDLFSFAQEDNTLGLFDVMQEPTQVSGIGKKKAAKVRQFHETLEQ
LIAVKESDLSLPQQVDQILKKSGYQAMLELDTSENAQTRLENINEFLALTNNYYQKNKSR
DLEDFLRDLRLFSDQDDLNEANQVKMMTVHAAKGLEFPVVFVVGVEEEIFPHYRSITTGE
REDIEEERRLCYVAMTRAEDRLFMSYARERKKYGETQEMIPSRFLDELPREVVLEKYHDL
GF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggatttaactgtagcattaaatgaaagacaacgtcaagcagtcgaaacaacggaaggg
gcagtgttagtattagcaggagccggtagtggaaagacgagagctttaacttatcggatt
gcttatttaatcgagcaaggagttgatccttataatattttaacattgacctttactaat
aaggctgctgaggatatggagcaaaaggttaaaaaattgataggtgatcagatatctaat
atgtatttaggaacttttcatagtgtttgtgttaggattttaagccagaatttagagcct
ttaggatatgaatcgggttttgtaatctatgaccaaagtgagactaaagctttagtctct
gatattattgttacctttgatttggataaagaaaagtatgaccctcaatctatctgtaga
atcattaataaagctaagcaaaatttatggactacagaagaattaatagattattatgag
gatacagatttttatcaaaatattgctgagatttatgttaagtataacgaagctttacaa
gataataatgcctttgattttaatgatttaattggaaaaacgattgaattatttgaagaa
aacgaggaaattttagagaaatatcaagagcgatttaaatatgtactaattgatgaatat
caggacacctcacctgtccaatatcaactagctagaatgttatcacgaaaacataataat
atctttgcggttggagatgattaccaaagtatctataaatttcggggagcagatatgagt
aatattcttgactttagtaccgattttgctgattgtaaggtaattaaactagaaagaaat
taccggtgtaaagccaatatcattgaagcttctaatgcggttattgaacacaattataac
caatctgataaacaggcttggactgataatgaaccaggagaaccaattgtaattgctgag
gctagtgatgagtatggtgaagctgattacatagttgatgaaattaataatttagttaga
tttacaggatatgattatagtgatattgctattttataccgttctaaccaccaatctaga
gttttggaggaggcttttgttaaacaaaggatcccttattatattgtaggtggtttaggc
ttttatgatcgtaaggagattaaggatattatcagttatttaaaagttgcagttaacccc
caagatacagtagctttaaaaagaattgttaatacccctaaaagaggtttagggcctagg
acaatagataaattaatcaatcatgcccaagagcatgtccctgaatttgatctctttagt
tttgcgcaagaggataatacattaggtttatttgatgttatgcaagagcctactcaagtt
tcaggaattggcaagaaaaaagcagctaaggtcaggcagttccatgagactttagagcaa
cttatagctgtaaaagaatccgatttatcattaccacagcaggtagatcagattttaaaa
aagagtggttaccaagcaatgttagagttagatacttctgaaaatgctcagactagatta
gagaatatcaatgaatttttagctctaacaaataattattaccaaaaaaataagagtaga
gatttagaagactttctaagagatttaaggttgttctccgatcaggatgatttaaatgaa
gctaatcaagtaaagatgatgacagttcatgctgctaaagggttagagtttccagttgtt
tttgtagtgggggtagaagaagaaatttttcctcattatcgaagtattacaacaggagag
agagaggatatagaagaagaaagaaggttatgttatgtagctatgactcgagctgaggat
aggttatttatgagttatgctcgtgaaagaaagaagtatggagaaacccaagagatgatt
ccttctcgtttcttagatgagttaccccgagaggttgttttagaaaaatatcatgattta
ggtttttaa
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