Halobacteroides halobius: Halha_2203
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Entry
Halha_2203 CDS
T02401
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
hhl
Halobacteroides halobius
Pathway
hhl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halha_2203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhl03400
]
Halha_2203
DNA repair and recombination proteins [BR:
hhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halha_2203
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Halha_2203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
PepSY
AAA_22
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AGB42081
UniProt:
L0KAN8
LinkDB
All DBs
Position
complement(2203831..2205804)
Genome browser
AA seq
657 aa
AA seq
DB search
MPQFELVSPYTPQGDQPKAIKDLATGIQEGLKEQTLLGVTGSGKTFSIANVIEKVQKPTL
VIAHNKTLAAQLCSEFKEFFPNNRVGYFVSYYDYYQPEAYVPQSDTYIEKDASINDEVDK
LRLAATSDLFERDDVIIVASVSCIYGLGNPTDYLDLTCYLKEGLIKERDEIIRELVNIQY
ERNDIDFDRGSFRVRGDTIEIIPAYQDKVYRVELFGDEIERIRQVDSVTGEVLGQLNEIT
IYPASHFVKPQDKVNRALKEIKAELEVRLKELEDEGKLVEAQRLKERTKYDMEMMEEVGT
CSGIENYSRHLENRPAGSRPQTLLDYFPDDFLLVVDESHKTIPQIGGMYAGDRSRKERLV
EHGFRLPSALDNRPLKFAEFEKLVKQAVYISATPGDYELDRSQQVVEQIVRPTGLVDPQI
AVRPIKAQIDDLLSEIQHVIANDERVLITTLTKNMAEDLTDYLANAGIKVSYLHSDIDTI
ERLEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSRTSLIQTVGRAA
RNVNGKVIMYADKMTDSMKEAIDETERRRELQVEFNQEHDITPETIRKEVRDVLRPVDMV
AESAADYNISNEETNQMSTEELEDKIAELEIEMKEAAEELQFEKAAELRDKIEELKK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgccacagtttgaattagtatcaccatataccccccaaggagaccaacctaaagctatt
aaagacttggcaactggtattcaagaaggcctgaaagagcagactctattaggagtgaca
ggctcaggaaagaccttttcaatagctaatgtaattgaaaaggtacaaaagccgacatta
gttattgcacataataaaactttagcagctcagttgtgtagtgaatttaaagaatttttt
cctaataatagagtaggatattttgtcagttattatgattattatcaaccagaggcttat
gtaccacaaagtgatacttatatagaaaaagatgcttctattaatgatgaagtggacaag
ttaagattggctgctacaagtgatttatttgaacgagatgatgtaattattgtagctagt
gtttcttgtatttatggcttaggtaatccaacagattacttggatttaacttgttattta
aaagagggattaattaaggaaagagatgaaataattagagagttagttaatattcagtat
gaacggaatgatattgattttgacagaggtagttttagagtcagaggagatactatagag
atcattcctgcttatcaagataaggtttatagggtagagttatttggagatgagatagag
cgtattaggcaggttgattcagtaacaggagaagttttaggacaattaaatgaaattacc
atttatccagctagtcactttgttaaaccgcaggataaagttaatcgagctctaaaagag
attaaagctgagttagaagtaaggttaaaagagcttgaagatgaaggtaaattagtagaa
gctcaacgattaaaagaaagaactaaatatgatatggagatgatggaagaagtgggtact
tgttcagggattgagaactattcaagacatttagagaatagaccagctggttcaagacca
caaacattattagattactttcctgatgattttttattggtagtagatgaatcccataaa
actattcctcaaattggaggaatgtatgctggtgatcgttctagaaaagagagattagtt
gagcatggttttagacttccttctgctttagataatcgtccgttaaagtttgctgaattt
gaaaaattagttaagcaagctgtttatatttctgcgacccctggagattatgaattagac
cggagtcaacaagtagtagagcagattgttcgcccaacaggtttagtcgatcctcaaata
gctgttagaccaattaaagctcaaattgatgatttattatctgaaattcagcatgtaatt
gcaaatgatgaacgtgtattaattaccactttgactaagaatatggctgaagatttaact
gattacttagctaatgctggaattaaagttagctatctacattcagatatagatactatt
gaacgattagagattattagagacctaagacttggaaagtttgatgtattagtaggaatt
aatttattgcgagagggacttgatataccagaagtatcattagtagctattttagatgct
gataaagaaggatttttaagatctaggacttctttaattcagacagttggacgagctgct
cgaaatgtgaatggaaaggtaattatgtatgctgataagatgactgattctatgaaagaa
gcaattgatgagacagaaaggaggagggaactacaggtagaatttaatcaagagcatgat
attactccagaaacaattagaaaagaagtacgtgatgttttaagaccagttgatatggta
gctgaatcagcggctgattataatatatctaacgaagaaaccaaccagatgtcaactgaa
gaactagaagataaaattgctgaattagaaatagaaatgaaggaagcagcagaagagtta
cagtttgaaaaggctgcagaactacgagataaaattgaagaattaaagaaatag
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