Halobacteroides halobius: Halha_2296
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Entry
Halha_2296 CDS
T02401
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hhl
Halobacteroides halobius
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhl03009
]
Halha_2296
Enzymes [BR:
hhl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Halha_2296
Ribosome biogenesis [BR:
hhl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Halha_2296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
PrmA
Methyltransf_11
TehB
PCMT
Methyltransf_32
Methyltransf_12
TPMT
RrnaAD
TRM
N6_N4_Mtase
UPF0020
Flot
NodS
RE_EcoO109I
DUF6953
ZZ
Motif
Other DBs
NCBI-ProteinID:
AGB42170
UniProt:
L0KC91
LinkDB
All DBs
Position
complement(2293327..2294688)
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AA seq
453 aa
AA seq
DB search
MVKPVKVGDMTTIKLENIAYGGDVVGRKDDFAIFVTGGVPGEVVKIKVTEVKRNYGRGKV
VDVVAPVEERIDSECPKYDLCGGCQMQHIDYTAQLNYKQQMVEDAIERIAKLDDIKINQV
KGMENPYLYRNKAQFPLGVEDEEVITGFYAAGSHKLIKVKDCQIQHPVINRIVDRAVKLI
EDYNLSIYNEEIHQGLLRHLVVRVGVCTNQAMLVLVTKDEKFVKGQEIAHKLLEEVPELI
SVYQNVNPEQTNVVLGDKTALLAGQEYILDYIGPIKYQISPLSFFQVNSLQTKVLYDQVL
EYAKLTGEEKVLDAYCGLGSISLYLANQAQEVYGIEVVPEAIEQAKENAKLNDINNCQFA
VGKVKDVLPQLKNQFSPEVIVVDPPRKGCHEEVLEAFAKIKPQRIVYVSCKPTSLARDLK
RLKDLGYYTEEIQPVDMFPQTYHIENVALIKKK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaccagttaaagtaggagatatgacaactattaaattagagaatatagcttat
ggtggagatgtagtaggtagaaaagatgatttcgctatttttgttactggtggagtgcca
ggagaagtagtaaagataaaggttacagaagtaaaaagaaattatggtcgggggaaggta
gtagatgtagttgcaccagtagaggaaagaattgattcggagtgtcccaagtatgattta
tgtggtggatgtcagatgcaacatattgattatacggcgcaacttaattataaacaacag
atggttgaagatgctatagagcggattgccaagctagatgatattaagattaatcaagtt
aagggtatggaaaatccttatctatatcgtaataaagctcagtttcctttaggggttgaa
gatgaagaagtaattacgggtttttatgcagctggaagtcataagttaattaaagttaag
gattgtcaaatccaacatccagttattaatcgaattgttgatagagcagtaaaattaata
gaggattataatttatctatttacaatgaagaaattcatcaagggctattgcgccattta
gtagtcagggtgggagtgtgtactaatcaagcaatgttagtcttagttactaaagatgag
aaatttgttaagggccaagaaatcgcccataaattactagaagaagtaccagagttaatt
agtgtttatcaaaatgtaaatccagagcaaactaatgtagtactaggagataagactgca
ttattagctggtcaagagtatatacttgattatattggcccaattaagtatcaaatctcc
cctttgtcattctttcaggttaattcgttacagactaaggtgctttatgatcaggtgtta
gagtatgctaagttgacaggtgaggagaaggtactggatgcttattgtggtttgggatct
atctctctctatttagccaatcaggcccaggaggtttatggtattgaggttgttccagaa
gcaattgaacaagctaaagaaaatgctaaattaaatgatattaataactgtcaatttgct
gtaggaaaggttaaggatgtgctacctcaacttaagaatcagttttcaccagaggtaatt
gttgttgatcctcctcgtaagggctgtcatgaagaagttttagaggcctttgcaaaaatt
aaacctcaacgaattgtgtatgtatcatgtaaaccaactagtttggcgagggatttaaag
aggctaaaagatttaggatattatacagaagagattcagccagttgatatgtttcctcag
acttatcatattgaaaatgtagcattgattaagaaaaaataa
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