Helicobacter heilmannii: BN341_13390
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Entry
BN341_13390 CDS
T02626
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hhm
Helicobacter heilmannii
Brite
KEGG Orthology (KO) [BR:
hhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhm03016
]
BN341_13390
Enzymes [BR:
hhm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BN341_13390
Transfer RNA biogenesis [BR:
hhm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN341_13390
Prokaryotic type
BN341_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CCM11417
LinkDB
All DBs
Position
complement(1204435..1205196)
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AA seq
253 aa
AA seq
DB search
MRRFKLTLAYDGSAFMGFAKQEGHNTIEGALESALKRLNISSLITAAGRTDKGVHAICQV
VAFDAPAFWSAPKLLAHLAPKLAPYIVCKSLELVDLDFHPRFCAYKRRYRYLFTQSPLSP
FFTRYMAAHPHGALEKIQEALNCFVGTHDFKYFCKTGSNPAHTRRTIFKAFCYPFKVGRL
DLVVVVLEANGFLRSQVRLMLKAVLKCSLGQLSLADLRAQIALKTRVCTDLAPSSGLYLS
RVFYPQPLSKNGI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctttaaactcacccttgcctacgatggtagtgcgtttatgggctttgccaag
caagaaggccacaacaccattgaaggtgcgctagaaagtgccctaaagaggctcaacatt
tctagcctcattacagcagcagggcgcacggataagggagtgcatgctatttgccaagtg
gtggcgtttgatgcccccgccttttggagtgcgcctaaactcttagcccaccttgcgcct
aaacttgccccctatattgtttgcaaaagtttggagctagtggatctagattttcacccc
cgcttttgcgcctacaagaggcgttaccgctaccttttcacccaaagccctttaagcccc
tttttcacccgttatatggcggcacacccccacggtgcattagaaaaaatacaagaagcc
ttgaattgctttgtgggcacacatgactttaaatatttctgtaaaacgggcagcaacccc
gcccacacaagacgcacgatttttaaagccttttgctacccttttaaagtggggcgttta
gacttggtggtggtggttttagaggccaatgggtttttacgatcccaagtgcgcttgatg
cttaaagcggtgctaaagtgctctttggggcagttgagcttagcggatttaagggcgcag
atcgcgcttaaaacgcgggtgtgtacggacttagccccctctagtggcctgtatttgagc
cgtgtattttatccacagcccttaagcaaaaatgggatataa
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