Haloarcula hispanica N601: HISP_00290
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Entry
HISP_00290 CDS
T02949
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hhn
Haloarcula hispanica N601
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhn03019
]
HISP_00290
Messenger RNA biogenesis [BR:
hhn03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
HISP_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Zn_Ribbon_YjdM
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
AHB64508
UniProt:
V5THD7
LinkDB
All DBs
Position
1:47871..49916
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AA seq
681 aa
AA seq
DB search
MSQQAAQVETLFLHEHGEEFRVAAHRDGERLFHGILELKETDAGPRPRRLRVKDGTSEEL
RSPDQFVDLARRAARIRISEQTAPRARERIREMLDAYQIEAKVARTCRLCASDGRYSPIT
SETAIETDDETICPECARQQLDRELAYKGNIGGDARDRLEELLLEVQDLDRVTNLLSGQL
DPDLTKFDEISATVDEVDPVRVDSLDLHPGMQEHLESRFDTLLPVQSLAVEHGATEGRDQ
LVVSATATGKTLIGEMAGIDRVLNNKGTMLFLVPLVALANQKYEQFQDRYGDMVDVSLRV
GASRIADEGGRFDPEADVIVGTYEGIDHALRTGKDLGTVGTVVIDEVHTLGEDERGHRLD
GLISRLKYYCESGGAPDSGDTQWIYLSATVGNPGQLADQLRATLIEFEERPVPIERHVTF
ADGREKIETEKKLVKRAFDNKSSKGYRGQTIIFTNSRRRCHQISRKLEYSSAPYHAGLDN
RKRQRVERQFADQELAAVVTTAALAAGVDFPASQVIFDSLAMGIEWLTVQEFSQMLGRAG
RPDYHDKGTVYMLVEPDCTYHNSMEMTEDEVAFKLLKGEMEPVITRYDEGAAVEETLANV
TVAGKQAKRLNDRMVGEVPTKHALGKLLEYEFIDGLSPTPLGRAVTRHFLAPDESFQLLD
GIRKGQHPYEIVADMELRDEH
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagcaggccgcacaggtagagacgctgttcctccacgaacacggcgaggagttc
cgcgtcgccgcccaccgggacggcgagcggctcttccacggtatcctcgaactcaaggag
accgacgccggcccccgcccgcgtcggctccgcgtcaaggacggaaccagcgaggagctt
cgctcgcccgaccagttcgtcgacctcgcccgccgtgcggcccgcattcgcatttcagag
cagactgctccgcgtgcacgcgagcgaattcgcgagatgctcgacgcgtaccagatcgag
gccaaggtcgcccggacctgtcggctgtgtgcctccgacgggcgctactcgccgattacc
agcgagacggctatcgagactgacgacgagaccatctgcccggagtgcgctcgccagcag
ctcgaccgagaactcgcctacaaaggaaacatcggcggcgacgctcgcgaccggctcgaa
gagctcctgctcgaagtgcaggacctcgaccgggtgacgaacctcctgtcgggccaactg
gacccggacctgacgaagttcgacgagatctcggccaccgtcgacgaggtcgaccccgtt
cgcgttgattcgctggacctccacccgggcatgcaagaacacctcgaatcccggttcgac
accctgctcccggtccagagtctcgccgtcgaacacggagccacggagggccgcgatcag
ctggtcgtgagcgcgacggcgacggggaagacgctcatcggcgagatggccggcatcgac
cgcgtcctgaacaacaagggaacgatgctgtttctcgtcccgctggtcgcgctcgcgaac
cagaagtacgagcagttccaggaccgctacggcgacatggtcgacgtgtcgctgcgcgtg
ggcgcgagccgcatcgccgacgagggcggacgcttcgaccccgaagccgatgtcatcgtc
gggacctacgagggaatcgaccacgcgctccggaccggcaaggacctcgggacggtcggg
accgtcgtcatcgacgaggtgcatacgctcggcgaggacgagcgaggccaccgcctcgac
ggcctgatttccagactcaaatactactgcgagtccggcggcgcacccgacagcggcgat
acgcagtggatttacctctcggcgacggtcggcaaccccggccaactggccgaccagctc
cgggcgacgctcatcgagttcgaggagcggccggtccccatcgaacgccacgtcacgttc
gccgacggccgcgagaagatcgagacggagaagaagctcgtcaagcgagccttcgacaac
aagtcgagcaaggggtaccgcggccagaccatcatcttcacgaactcccgacgccggtgt
caccagatttcacgcaaactggagtacagctccgcgccgtaccacgccgggctggacaac
cggaagcgccagcgggtcgagcggcagttcgccgaccaggagttggcggcggtcgtgacg
acggcggcgctggcggcgggggtcgacttcccggcctcgcaggtcatcttcgactcgctt
gcgatgggtatcgagtggctcaccgttcaggagttcagccagatgctcggccgggctggt
cgcccggactaccacgacaagggcaccgtctacatgctggtcgagccggactgtacgtac
cacaacagcatggagatgaccgaggacgaggtggcgttcaagctcctgaaaggcgagatg
gagccggtcatcacccgctacgacgagggcgcggccgtcgaggagacgctggcgaacgtc
accgtcgccggcaagcaggccaagcggctcaacgaccggatggtcggcgaggtcccgacc
aagcacgcgctcgggaagctactggagtacgaatttatcgacgggctctcaccgacgccg
ctcggccgagccgtgacccggcacttcctcgcgcccgacgagtcgttccagctgctcgac
ggcatccgaaagggacagcacccctacgagatcgtcgccgacatggaactgcgcgacgag
cactga
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