Haloarcula hispanica N601: HISP_01200
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Entry
HISP_01200 CDS
T02949
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhn
Haloarcula hispanica N601
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhn03032
]
HISP_01200
03400 DNA repair and recombination proteins [BR:
hhn03400
]
HISP_01200
Enzymes [BR:
hhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HISP_01200
DNA replication proteins [BR:
hhn03032
]
Prokaryotic type
DNA Topoisomerases
HISP_01200
DNA repair and recombination proteins [BR:
hhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HISP_01200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Zn_ribbon_Top1
Zn_ribbon_6
Auto_anti-p27
HypA
Zn_ribbon_TFIIB
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AHB64682
UniProt:
V5TIA5
LinkDB
All DBs
Position
1:215090..215812
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AA seq
240 aa
AA seq
DB search
MHDGTRVIAGECTTVFEGTREREQRGDVLVVVKPDNTVLVHDAEGYQPVAWLTRAESVTI
DDGAVTARDGDELLRVVPHEEHGSARYPASNAGVPVRDCPDCAGTLVRTRSDVTCTGCDA
AYGIPSDAAVTGGRCDDCGLPTLRVERGRAFELCLDRDCDSLDDAVTAAFDREWDCPNCD
GDLLMLRRGGLLAGCEHYPDCDTGFSIPSGVVVGDCDCGLPLFETAGGTRCLDSSCSELG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacggaacccgtgtgatagctggcgaatgtacgaccgttttcgagggaacgcgc
gagcgggagcagcgcggcgacgtgctcgtcgtcgtcaagccggacaataccgtcctcgtt
catgatgctgaagggtatcagccggtcgcgtggctcacgcgcgccgaaagcgtcaccatc
gacgacggggcggtgaccgcccgcgacggcgacgaactcctccgggtggtccctcacgag
gaacacggcagtgcccgctatccggcctcgaacgctggtgtcccggtgcgtgactgcccc
gactgcgccggaacgctggtccgcacccgaagcgatgtcacctgtactggctgtgacgcc
gcctacggaattccgagcgatgccgcggtcaccggcggccgctgtgacgactgcggactc
cccacgcttcgggtggaacgcgggcgggcgttcgaactgtgccttgaccgggattgtgac
tcgctggacgacgctgtcaccgcggccttcgaccgcgagtgggactgtcccaactgcgac
ggtgacctgttgatgctccgccgcggcggcctgctcgccggctgtgagcactaccccgac
tgcgacaccggcttctcgatcccgtcaggcgtcgtcgtcggcgactgtgactgtggcttg
ccgctgttcgaaactgccgggggaacgcggtgtctggacagctcctgttcggaattgggg
tga
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