Haloarcula hispanica N601: HISP_01205
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Entry
HISP_01205 CDS
T02949
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hhn
Haloarcula hispanica N601
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhn03016
]
HISP_01205
Enzymes [BR:
hhn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HISP_01205
Transfer RNA biogenesis [BR:
hhn03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HISP_01205
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AHB64683
UniProt:
V5THW3
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All DBs
Position
1:216076..217110
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AA seq
344 aa
AA seq
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MELTLDGDVVRAGYEARERFYDSRGYGKVRNGDIDLSPVEAAHLLYRGDIESIDGMDFRA
FLGSAAVSEVDFAVYKDLRDRGFYLTPAREGWVDDAAGADFVVYPRGKGPWDNEVAYRVR
VIGERDTVDATALGGCVLAVVDEESEVTYLDTDRREVSGTSDAAVPATAGELLGERVVCW
EPPAELYDQAFYGQQLGDDGAVQLSLVEAAYLAQEGLLTVDGGADAVVGRGREVEGDRFD
RRLAVYTALRASGVAPKTGFKFGADFRTYADVESAENLGHSELLVRVLPADHRFEPRDLA
LDVRLAHGVRKTMVFALTADGGDGSGDSGNGNDLEWIAVERLTP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaactgacgctcgacggtgatgtcgtgcgggccggctacgaggcgcgcgagcggttc
tacgactcgcgcggctacgggaaggtccgcaacggcgacatcgacctgtccccggtggag
gccgcacacctcctctaccgcggagatatcgagagcatcgacgggatggacttccgcgcg
ttcctcgggtcggcggccgtctccgaggtcgatttcgccgtctacaaagacctgcgggac
cgcggtttttacctcacgcccgcccgcgaaggatgggtcgacgacgccgcgggcgcggac
ttcgtggtctacccgcggggaaaggggccgtgggacaacgaagtggcctaccgcgtccgg
gttatcggcgagcgtgataccgtcgacgcgacggccctgggcggctgcgtgctggcggtc
gtcgacgaggagagcgaagtgacgtacctcgataccgaccgacgcgaggtctccgggacc
agcgacgccgccgtcccagcgacggcgggtgaactgctcggagagcgggtggtgtgctgg
gaaccgccggcggagctgtacgatcaggcattctacgggcagcaacttggcgacgacggc
gcggtccagctctcgctcgtggaggccgcgtatctcgcacaggaggggctgctcacggtc
gatggcggggccgacgctgtcgtcgggcggggtcgcgaggtcgagggcgaccgcttcgac
cgccggctggccgtctatacggcgctgcgagcgagcggcgttgcgccaaagaccggcttc
aaattcggcgcggacttccggacctacgccgacgtcgaaagtgccgagaaccttgggcac
tcagagctactggtgcgggtgctgccggccgaccaccgcttcgagccgcgggacctcgcg
ctggacgttcgcctggcccacggcgtccggaagacgatggtgttcgctctcacggcggac
ggtggcgacggtagtggcgatagcggcaacggcaacgatctcgagtggatcgccgtcgag
cggctgacgccctga
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