Haloarcula hispanica N601: HISP_01370
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Entry
HISP_01370 CDS
T02949
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HISP_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhn03400
]
HISP_01370
DNA repair and recombination proteins [BR:
hhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HISP_01370
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HISP_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_30
UB2H
HEM4
DUF7934
DUF87
DUF8048
BTB-POZ_ANK-like
Met_synt_B12
DELLA
Motif
Other DBs
NCBI-ProteinID:
AHB64707
UniProt:
V5TIC6
LinkDB
All DBs
Position
1:246396..248456
Genome browser
AA seq
686 aa
AA seq
DB search
MSDTGGPLSIDRPDVDREFRVDAPFEPAGDQPEAIEGLASGYRQGMDRQTLLGVTGSGKT
NTVSWVVEEIQQPTLVIAHNKTLAAQLYEEFRELFPDNAVEYFVSYYDYYQPEAYVEQTD
TFIDKDASINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPRNYIDMSLSLEVGQE
IERDDLLGRLVDLNYERNDVDFTQGTFRVRGDTLEIYPMYARYALRVEFWGDEIDRMLKV
DPLEGEVKSEEPAALLHPAEHYSIPEQRLQRAIDEIEELLDQRISYFERQGDHVAAQRIE
ERTTFDIEMMQETGYCSGIENYSVHLSDRETGEAPYTLLDYFPDDFLTVVDESHQTLPQI
RGQFEGDKSRKESLVENGFRLPTAFDNRPLTFEEFEEKTDQTLYVSATPGDYEREHSDQV
VEQIVRPTHLVDPAVEIASATGQVEDLLERIDERVERDERVLVTTLTKRMAEDLTEYLEE
SGVNVAYMHDETDTLERHELIRSLRLGDIDVLVGINLLREGLDIPEVSLVAILDADQEGF
LRSETTLVQTMGRAARNVNGEVVLYADERSNAMQAAIQETQRRRRIQQQYNEEHGFEPTT
IEKEVGETNLPGSKTDTGGISSDGASDADEAARQIEQLEERMQEAADNLEFELAADIRDR
IRELREEFDLDGGDDSDGVPAPGPEF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccggcggaccactctctatcgaccgaccagatgtcgaccgcgagttccgt
gtcgacgccccgttcgagccggcgggcgaccagcccgaggctatcgaagggctcgcgtcg
ggctatcgccaggggatggaccggcagaccctgctcggtgtgactggctccgggaagaca
aacaccgtttcctgggtcgtcgaggagattcagcaaccgaccctcgttatcgcccacaac
aagaccctcgcggcccagctctacgaggagttccgcgagctgttcccggataacgccgtc
gagtacttcgtctcctactacgactactaccagcccgaggcttacgtcgagcagacggac
accttcatcgacaaggacgcctccatcaacgacgagatcgaccggctgcgccactccgcg
acgcgctcgctactcacccgggacgacgtcatcgtcgtcgcgtcggtgtcggccatctac
gggctcggtgacccgcgaaactacatcgacatgtccctctcgctcgaggtgggccaggag
atcgagcgcgacgacctgctcggtcggctggtcgacctgaactacgagcgcaacgatgtg
gacttcacgcaggggaccttccgcgtgcgcggggacacgctggagatctacccgatgtac
gcccgctacgccctccgagtggagttctggggcgacgagatcgaccggatgctgaaggtc
gacccgctggagggcgaggtcaaaagcgaggaaccggccgccctgctccacccggcggag
cactactcgattcccgaacagcggctccagcgggccatcgacgaaatcgaggaactgctg
gaccagcgtatcagctacttcgagcgacagggcgaccacgtcgccgcccagcgcatcgag
gagcggaccacgttcgacatcgagatgatgcaggagacgggttactgctcgggcatcgag
aactactcggtccacctctcggaccgtgagaccggcgaagccccatacaccctgctggat
tacttccccgacgacttcctcaccgtcgtcgacgagtcccaccagacgctcccccagatc
cgcggccagttcgagggcgacaagagccgcaaggagagcctcgtcgagaacggcttccgc
ctgccgacggccttcgataaccgcccgctcaccttcgaggagttcgaggagaagaccgac
cagacgctgtacgtgagcgccacgcccggtgactacgagcgcgaacacagcgaccaggtg
gttgagcagattgtccgccccacccacctcgtggacccggccgtcgaaatcgcatcggcg
acgggacaggttgaggacctgctggagcgaatcgacgagcgcgtcgaacgcgacgagcgg
gtgctggtgaccacactcacgaaacgcatggccgaggacctcacggagtacctcgaagag
tccggcgtgaacgtcgcctacatgcacgacgagacggacacgctggaacggcacgaactc
atccggtcgctccggcttggcgacatcgacgtgctggtcggcatcaatctcctccgggag
gggctggacatccccgaggtgtcgctcgttgcgattctggacgccgaccaggaggggttc
ctccggtcggagacgacgctggtacagacgatgggccgggccgcccggaacgtcaacggc
gaggtcgtgctgtacgccgacgagcgcagcaacgccatgcaggcagccatccaggagacc
cagcgccgccggcgcatccagcagcagtacaacgaggaacacggcttcgagccgacgact
atcgagaaggaagtcggcgaaacgaacctgccggggagcaagaccgacaccggcggcatt
tccagcgacggcgcgagcgacgccgacgaggccgcccgccagatagagcaactggaagaa
cggatgcaggaggccgcggacaacctggagttcgaactggccgcggacatcagagaccgc
atccgcgaactgcgcgaggagttcgatctggacggcggcgacgacagcgacggcgtgccg
gcacccggtccggagttctga
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