Haloarcula hispanica N601: HISP_08140
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Entry
HISP_08140 CDS
T02949
Name
(GenBank) mRNA surveillance protein Pelota
KO
K06965
protein pelota
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HISP_08140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhn03019
]
HISP_08140
Messenger RNA biogenesis [BR:
hhn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HISP_08140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-ProteinID:
AHB65986
UniProt:
V5TKX1
LinkDB
All DBs
Position
1:complement(1537809..1538876)
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AA seq
355 aa
AA seq
DB search
MQIQSQETTAEGAERIEVVPETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGE
REPMWIQIEVTDVEFAKFANRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPD
QADRLEEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERATITSTTGKGEYARPRKELF
DELASVLKRQDVDAYILAGPGFTKQDALDHFQDEIPDIAEQITVVDTSAVGDRGVHEVLK
RGAVEDVQQQTRIAEEADYIDELMERIGSGSEVAYGPEEVAKAADYGAIETLLVLDERLR
LERAGEGDWDIDVDQIIETTEQKGGDVTVFSAEFAPGQQLSNLGGIAALLRYRLD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatacagagtcaggagaccaccgccgaaggggcagagcgcatcgaggtggtcccc
gagacgctggacgacctctggcatctctcgtacgtcatcgagccgggggacctcgtctcc
ggcgacacgacccgtcgcatccagcgcaacgacgacaacctccgggacaaaggcggcgag
cgagagccgatgtggattcagatcgaggtcaccgacgtggagttcgcgaagttcgccaac
cgcctccgggtcggcggcgaaatcgtcgactgctctcgggaggaccaactgggttttcac
cacacgctcaacgtcgaggaacacaccgaactcaccgtcgaaaagcatctcaaaccggac
caggccgaccgcctggaggaggccgtcgaagccacggagaaccccgatgtggcgatcgcg
accgtcgaagagggtgaggcccacgtccacaccgtcgcccagtacggcacagaggagcgg
gcgaccatcacctcgacgactggcaagggcgagtatgcccgcccgcgcaaggaactgttc
gacgaactggcgtcagtcctcaaacgccaggacgtggacgcctacatcctcgcgggtccc
ggcttcaccaaacaggacgcgctagaccactttcaggacgagattcccgatatcgccgag
cagattaccgtcgtagacacgtctgctgtcggcgaccgaggcgtccacgaagtactcaaa
cgcggcgctgtcgaggacgtgcaacagcagacccgcatcgccgaggaggcggattacatc
gacgaactgatggagcgcatcgggtcgggttcggaggtggcctacggcccggaggaagtc
gccaaggcggccgactacggcgctatcgagacgctgctcgtgctcgacgagcggctccga
ctggagcgggccggcgagggcgactgggacatcgacgtcgaccagatcatcgagacgaca
gagcagaaggggggcgacgtgaccgtcttctccgcggagttcgcgcccggccagcagctc
tcgaacctcggtggcatcgccgcgctacttcggtaccgactcgattga
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