Haloarcula hispanica N601: HISP_08920
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Entry
HISP_08920 CDS
T02949
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HISP_08920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhn03400
]
HISP_08920
DNA repair and recombination proteins [BR:
hhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HISP_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_21
AAA_28
ALTTAQ_rpt
IMS_HHH
AAA_14
AAA_23
AAA_29
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AHB66116
UniProt:
V5TLE3
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Position
1:1704604..1706361
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AA seq
585 aa
AA seq
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MRLEEYWGIGPKTSELLTEELGVERAIEAIESADTRALTTAGLSRGRATRILRRATGAES
MDLLATRDTRDVYKELLDLAEEYAVTEDAADSIRVLTPLPTREAMDERLDDVLEARDTWA
DLSEADQRAVLDAFDAFDADGGELAAVDVALALRDTGIESGVFEPLAALDGESLTAGRAA
LAGLAGDGESVGEGADEELDRLRDQLGQIEDLAAASMEVVEAVQEGARRPDEFQDALVRH
VTGETGIDAARVRDAMPREATDARDFVDVALRELRSTLRSDVREREGTVADRLEDDLADA
RGDIDAAIEAVDDIAFSVSLARFAIAFDLTRPAFVEDRKTIAVKRARNLTIADVESVQPV
TYAIGDHTLDLDRANQPPSGDRVAVLTGANSGGKTTLLETLCQVQLLAQMGLPVPAEAAE
VGIVDTVVFHRRHASFNAGVLESTLRSVVPPLTESDRTLMLVDEFEAITEPGSAADLLHG
LVTLTVDRDALGVFVTHLADDLEPLPVEARVDGIFAEGLNQDLELQVDYQPRFGTVGKST
PEFIVSRLVANAKDPVERNGFETLATAVGEEAVQRTLSDALWTDE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggaggagtactggggcatcggcccgaagacgtccgaactgctcaccgaggag
ctgggcgtcgagcgggctatcgaggccatcgagtcggcggatacgcgtgcgctaaccacg
gccggcctctcccgggggcgagcgacgcgcatcctccggcgggcgaccggggccgagtcg
atggacctgctcgccaccagagatacccgcgacgtgtacaaggaactactcgacctcgcc
gaggagtacgcggtcaccgaagatgcggccgacagcatccgggtgctgacgccgctaccg
acccgcgaggcgatggacgagcggctggacgacgtgctcgaagcgcgggatacgtgggcc
gacctctcggaggcggaccagcgggccgttctcgacgcgttcgacgcgttcgacgctgac
gggggtgaactagccgcagtcgacgtggcgctcgcactccgggacactggcatcgagagc
ggcgtgttcgagccgttagcggccctcgacggcgagtcactgacggctggccgggcggcg
ctcgccggcctcgcgggcgacggcgagtccgtcggcgaaggggccgacgaggaactcgac
cgcctgcgcgaccagctcgggcaaatagaggatcttgcagcggcatcaatggaggtcgtc
gaggccgttcaggagggcgctcggcggcccgacgagttccaggacgcgctcgtccggcac
gtcacgggcgagacaggtatcgacgctgccagagtccgcgacgcgatgccccgcgaggcg
accgacgcgcgggatttcgtcgacgtggcgctccgggaactccgaagcacgctccgaagc
gacgtccgggagcgcgaggggacggtcgccgaccggctggaagacgacctcgcggacgcc
cgcggggacatcgacgccgccatcgaggcggtggacgacatcgcgttctcagtgtcgctc
gcccgcttcgccatcgcgttcgacctgacgcggcccgccttcgtcgaggaccgcaagacc
atcgcggtgaagcgggcccggaacctcaccatcgccgacgtggagagcgtccagccggtc
acctacgctatcggcgaccacacactggacctagaccgggcgaaccagccgccaagcggc
gaccgggtggccgtcctgaccggcgcgaactccggcgggaagacgaccctgttggagacg
ctgtgccaggtccagctgctcgcccagatgggactgcccgtccccgccgaggccgccgag
gtgggcatcgtcgacaccgtcgtgttccaccgccggcacgcgtcgttcaacgccggcgtc
ctcgaatcgacgctgcgttcggtcgtgccgccgctgaccgagagcgaccggacgctgatg
ctcgtcgacgagttcgaggctatcaccgagcccggctccgccgccgatctcctccacgga
ctcgtgacgctgaccgtcgaccgcgacgcgctgggcgtgttcgtcactcacctcgcggac
gatctcgaaccgctgcctgtcgaggcccgtgtcgatggcatcttcgccgaagggctgaat
caggacctcgaactacaggtcgactatcagccccggtttggcactgtcgggaagtccacg
ccggagttcatcgtctccaggctcgttgcgaacgcaaaggaccccgtcgaacgcaacggg
ttcgagacgctcgccacggctgtcggcgaggaagcggtccagcggacgctctcggacgcg
ctctggactgacgagtag
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