Haloarcula hispanica N601: HISP_10680
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Entry
HISP_10680 CDS
T02949
Name
(GenBank) CdcH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HISP_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhn03019
]
HISP_10680
03009 Ribosome biogenesis [BR:
hhn03009
]
HISP_10680
04131 Membrane trafficking [BR:
hhn04131
]
HISP_10680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhn04147
]
HISP_10680
Messenger RNA biogenesis [BR:
hhn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HISP_10680
Ribosome biogenesis [BR:
hhn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HISP_10680
Membrane trafficking [BR:
hhn04131
]
SNARE
SNARE associated proteins
Others
HISP_10680
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HISP_10680
Exosome [BR:
hhn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HISP_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
Mg_chelatase
AAA_7
AAA_18
ABC_tran
AAA_3
Sigma54_activat
AAA_17
Parvo_NS1
NB-ARC
AAA_30
AAA_24
DUF815
TsaE
ATPase
AAA_11
PhoH
SLFN-g3_helicase
AAA_lid_PRS2_C
NACHT
IPT
Vps4_C
DUF3306
Motif
Other DBs
NCBI-ProteinID:
AHB66448
UniProt:
V5TMW8
LinkDB
All DBs
Position
1:complement(2036697..2038922)
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSDTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKRDDFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEW
PMNSPEKFERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTIIFFDELDSLAPGRGGEMGSNVSERVVNQLLTELDGLEEMEDV
MVIGATNRPDMIDPALIRSGRFDRLVMIGEPDVEGREQILKIHTDDTPLSPDVSLRELAE
VSDGFVGSDLESIAREAAIEALREDDDAEEVEMRHFRQAMDSVRPTITDDIREYYEQMEE
EFRGGSSPQRQAGTGGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaattggaagtggcgaaggcgtacccgaacgactcgggacgcggtatc
gccagactcgaccccgatacgttgttgcatctcaagctctcccccggagacatcatcgag
atagaggggagcgacacgaccgcggccaaggtgtggcgggccgaccggcaggactggaac
actgacactgttcgcatcgacggcttcacgcgccagaatgctgacgtgggtattggtgag
cgcgtcacaatccggaaggccgaggccgagaaggccgacaagctcgttctcgcgccgccc
gaggaagcgtcggtccagttcggctccgacgccgctggcatggttaagcggcagatattg
aaacggccggtcgtcgagcgcgacatcgtcccggtgatgtcctcgacgaaccacccgttc
atgcgctcgcccggacaggccatcccgctcatcgccgtcgagaccgagcccgagggcgtc
tgtctcatcaccgaagacaccgaggtggaactccgcgaggaaccgatctccggcttcgag
aagaccggcggtggcatcacctacgaggacatcggcggcctgcaaaacgagatccagcgg
gtgcgagagatggtcgaattgccgatgaaacacccccagatcttcaagaagctcggcatc
gagccgccacagggggtcctgttgcatgggccgcccggaaccgggaagacgctgcttgcg
aaggccgtcgccaatgaaacctctgccagtttcttctctatcgccggccccgagataatc
tcgaagtactacggggaaagcgaacagcagttacgcgagatattcgaggacgcgagcgag
gaatcgccctcgatcatcttcatcgacgagctggactccatcgcgcccaagcgtgaggac
gtgaccggcgaggtcgagcgccgggtcgtcgcccagctgctgacgatgatggacggcctc
gaatcgcgggggcaggtcatcgtcatcgccgcgacgaaccgcgtcgacagcgtggacccg
gcgctgcgtcgcccgggccgcttcgaccgcgagatcgagatcggcgtcccggacgaagtc
ggtcgcgaggagatcctccagattcacacccgcggcatgccactgtccgatgacgtgaat
ctggcgaagctggcgacggacacgcacggcttcgtcggagccgacatcgagagtctcacg
aaggaggccgcgatgaaggcgctccggcgctaccttcccgagatcgatctggacgaggag
gacatcccgccgagcctcatcgaccggatgatcatcaagcgggacgacttcaagggcgca
ctcaacgaggtgagtccgtcggcgatgcgggaggtgctggtcgagctcccgaagatgtcc
tgggacaacgtcggcggcctcagcggccccaaagagcaggtccaggaggccgtcgagtgg
ccgatgaactccccggagaagttcgagcgcatgggcgtgacgccgccctcgggggtgttg
ctgtacggcccgcccggcaccggaaagacgctcatggcgaaagccgtcgccaacgagacc
gacgcgaactttatctcagtccgtggcccgcaactgctctcgaagtgggtcggcgagagc
gagaaggccatccggcagacgttccggaaggcccgccaggtcgccccgaccatcatcttc
ttcgacgaactcgactcgctggcaccgggtcggggcggcgagatgggatcgaacgtctcc
gagcgcgtcgtcaatcagctcctgaccgaactcgacgggctcgaagagatggaggacgtg
atggtcatcggcgcgaccaaccggccggacatgatcgacccggcgctcatccgctcgggc
cggttcgaccgcctggtgatgatcggcgagcccgacgtcgagggccgcgagcaaatcctg
aaaattcacacggacgacacgccgctgtcgcccgacgtgagcctgcgcgaactggccgaa
gtcagcgacgggttcgtcgggtcggacctcgaatccatcgcccgcgaagccgccatcgag
gcgctccgcgaggacgacgacgcggaggaagtcgagatgcgtcacttccggcaggcgatg
gacagcgtgcggccaaccatcaccgacgacatccgggagtactacgagcagatggaagag
gagttcagaggcggttccagtccgcagcgccaggccgggaccggcggccggatcggcttc
cagtaa
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