Haloarcula hispanica N601: HISP_12960
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Entry
HISP_12960 CDS
T02949
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HISP_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhn03021
]
HISP_12960
Transcription machinery [BR:
hhn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HISP_12960
Prokaryotic type
Archaeal type
TFB
HISP_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
Trm112p
Cas12f1-like_TNB
Auto_anti-p27
DZR_2
DUF1272
DZR
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AHB66873
UniProt:
V5TP56
LinkDB
All DBs
Position
1:complement(2482748..2483767)
Genome browser
AA seq
339 aa
AA seq
DB search
MTTRSIYSPDERDESADEQAESEASTGHACPDCGGSLVTDDSRGETVCEACGLVVDEDEI
DHGPEWRAFDSQERDNKRRVGAPTTEMKHDKGLSTNIGWQNKDAYGNSLSTRQREKMQRL
RTWDERFRTRDHAERNLKQALGEIDRMGSALGVPESARETASVIYRRALDEGMLPGRSIE
GMATAALYAAIRQSNLPQTLDDMAVVSRVDEMEFTRAYRYLNRELSLQVGPPDPATYLSK
FISELDADDALERQARALIEAGKEANVHSGKSPVGLAAAAIYAAGLLLGEEMTQETVSEA
TDISTVTIRERYRELLEAEAELDDSAVDATSGAESGASA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacgcagcatctattcccccgacgaacgcgatgaaagtgcggacgaacaggcc
gagtccgaggcgagcactggccacgcctgcccggactgtggcggaagcctcgtcaccgac
gacagtcgcggcgagacggtctgtgaagcctgcggcctcgtcgtcgacgaggacgagatc
gaccacggcccggagtggcgcgccttcgacagccaggagcgcgacaacaagcgccgcgtc
ggtgccccgacgacggagatgaaacacgacaagggcctctcgaccaacatcggctggcag
aacaaggacgcctacggcaactccctgtcgacgcgccagcgcgagaagatgcagcgcctg
cggacctgggacgagcggttccgcacccgcgaccacgccgagcgcaacctcaagcaggcg
ctgggcgagatcgaccgaatggggagcgctctcggcgtccccgagagcgcccgcgagacg
gccagcgtcatctaccgccgtgccctcgacgagggaatgttgcccggtcgctccatcgaa
gggatggcgactgccgccctgtacgccgcaatcagacagtcgaacctcccacagacgctc
gacgacatggccgtcgtcagccgcgtcgacgagatggagttcacccgcgcgtaccgctat
ctcaaccgcgaactctcgctgcaggtcggcccgccggaccccgcgacctacctcagcaag
ttcatctccgaactcgacgccgacgacgccctcgaacgccaggcccgcgccctcatcgag
gcggggaaggaagcgaacgtccacagcggcaagagccccgtcggcctcgccgccgcggcc
atctacgccgccggcctgctgctgggcgaggagatgacccaggaaaccgtcagcgaggcc
acggacatcagcactgtgaccatccgcgagcgctaccgcgaactgctggaagccgaagcg
gaactcgacgacagcgccgtcgacgcgacgagcggcgctgaatccggtgcgagcgcctga
DBGET
integrated database retrieval system
