Haloarcula hispanica N601: HISP_16405
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Entry
HISP_16405 CDS
T02949
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HISP_16405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhn03021
]
HISP_16405
Transcription machinery [BR:
hhn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HISP_16405
Prokaryotic type
Archaeal type
TFB
HISP_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF7575
Zn_ribbon_TiaS
Cas12f1-like_TNB
XRCC4_C
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AHB67627
UniProt:
V5TRQ9
LinkDB
All DBs
Position
2:98994..99905
Genome browser
AA seq
303 aa
AA seq
DB search
MSRNMSLQTVQTALSTATPSCPECGGELDSSGRETNCEDCGLVTEQDQIDRRPEWRTYDK
EEQQRTGAPRTATRHDRGLSTNIGSVDSADISPRRRRRLARQRQLHGRSKFTSKRDRNLA
HGLGETRRIASALSESNAVKEQAATFFKEAQNKDLLIGRSIEGGAAAAVYAACRCNGLVT
METVADVARCSASHIWNCYRTFLVELDLPIPVSLPVDWVARICSDLPFNVSPEIRQRALK
LAQQATESTEINGRPDGIAVGALYLAGKESDIRLTQATICEPLDVHITTARQWFQKIEEH
IVA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaaatatgtctttacaaactgtccagacagcgttgtctacagctacgccgagc
tgtcccgagtgtggcggcgaactcgatagcagcgggcgagaaacgaactgcgaggactgt
ggcctggtgaccgagcaagaccagattgaccgcaggccggaatggcggacgtacgacaag
gaggaacagcagcggacgggcgcacctcggacggccactcgccacgaccgaggcctgtcg
acgaatatcggaagcgtcgatagtgcagatatttccccgagacggcgtcgacggcttgct
cgccagcgacaactccacggccggtcgaagttcaccagcaagcgcgaccggaatctcgct
cacgggcttggcgaaacccgacgcatcgcgagtgcgctgtctgagagcaacgcggtgaaa
gagcaggcagccacgttcttcaaggaagcccaaaacaaggacctcctgatcggacggtcg
attgagggcggtgcagcggccgctgtgtacgccgcctgccggtgcaatggcctcgtgacg
atggagacggtagccgatgtcgcacggtgttctgcatcgcatatctggaactgctaccgg
acgttcttggtggaactcgatctcccgattccagtgtcgcttccggtggactgggtggcg
cggatttgttcggaccttccattcaacgtttccccggagattcgccagcgagcgctcaaa
ctcgcacagcaggcgaccgagtccaccgagatcaacgggcgaccagacggtatcgcagtc
ggcgctctgtacctcgccgggaaagagtcagacatccggctcacgcaagcgacgatctgc
gagccgctggatgtgcatattaccacggcccggcagtggttccagaagattgaggagcat
atcgttgcgtga
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integrated database retrieval system
