Haloarcula hispanica N601: HISP_18125
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Entry
HISP_18125 CDS
T02949
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HISP_18125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhn03021
]
HISP_18125
Transcription machinery [BR:
hhn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HISP_18125
Prokaryotic type
Archaeal type
TFB
HISP_18125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
DUF7575
FYVE
Zn_ribbon_TiaS
XRCC4_C
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AHB67972
UniProt:
V5TSL8
LinkDB
All DBs
Position
pHH126:120812..121723
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AA seq
303 aa
AA seq
DB search
MSRNMSSQTVQTALFAATSGCPECGGELDSSGRETNCKDCGLVTDQDRIDRRPSWRTYDQ
EEQQRTGAPRTVTRHDRGLSTNIGSVDSADISPRRRRRLARQRRLHGRSKFTSKRDRNLA
HGLGEIRRIASALSESNAVKEQAATFFREAQEKDLLIGRSIEGGAAAAVYAACRCNGLVT
METVADVARCSDSHIWNCYRTFLVELDLPIPVSLPVDWVARICSDLPFNVSPEIRQRALE
LAEQATESTAVNGRPDGVAAGALYLAGKESDIRLTQATICEPLDVHITTARQWFQEIEEH
IVA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaaatatgtcttcacaaactgtccagacagcgttgtttgcagctacgtcgggt
tgtcccgagtgtggcggcgaactcgatagcagcgggcgagaaacgaactgcaaggactgt
ggcctggtgaccgaccaagaccggatcgaccgcaggccatcgtggcgaacgtacgatcag
gaggaacagcagcggacgggcgcacctcggacggtcactcgccacgaccgaggcctgtcg
acgaatatcgggagcgtcgatagtgcagacatctctccgagacggcgtcgacggcttgct
cgccagcgacgactccatggccggtcgaagttcaccagcaagcgcgaccggaacctcgct
cacgggcttggcgaaatccgacgcatcgcgagtgccctgtctgagagcaacgcggtaaaa
gagcaggcagccacgttcttccgggaagcacaggaaaaagacctcctgatcggacggtcg
attgagggcggtgcagcggccgctgtgtacgccgcctgccggtgcaatggcctcgtgacg
atggagacggtagccgatgtcgcacggtgttcagactcccatatatggaactgctaccgg
acgttcttggtggaacttgaccttccgattccagtgtcgcttccggtggactgggtggcg
cggatttgttcggaccttccattcaacgtttccccggagattcgccagcgggcactcgaa
ctcgcagagcaggcaactgagtcaacagcggtcaacgggcgaccagacggtgtcgcagcc
ggcgctctgtacctcgccgggaaagagtcagacatccggctcacacaagcgacgatctgc
gagccactggatgtgcatattacgacggcccggcagtggttccaagagatcgaggagcat
atcgttgcgtga
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integrated database retrieval system
