Hydrogenobaculum sp. HO: HydHO_0062
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Entry
HydHO_0062 CDS
T02482
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
hho
Hydrogenobaculum sp. HO
Pathway
hho03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HydHO_0062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hho03011
]
HydHO_0062
Ribosome [BR:
hho03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HydHO_0062
Bacteria
HydHO_0062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
RNase_II_C_S1
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
AGG14402
UniProt:
M1R5I3
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All DBs
Position
complement(55132..56706)
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AA seq
524 aa
AA seq
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MVTEFEELLKAQKEQFSTGSVVKGSVVKITDSNVYLDIGYKIEGVIRRYEVGDVEIGQEI
EAVIVKLRGLENPILSTKPLKSFKGFSIAKKALEEKTPIEVTVESKGRPGFFVQLEDIRA
LMPFGEAPRHVNIGDKIKVLVTKATYENGKPIVNVSYKEYENIERHQKQLEFINSLEVGS
TIEGKVIKIDPEKGITVLLKEGVRGFVPHYEIPKGTNVKENDTLEVRVIKKAKKGNFIIL
SLKKPKKNILETLELKEGDKTEGKVSFYKKGKGLFVELKEGIIALVPEESMKDIGKPLKN
GTKLKLVVTRIDKDKKQIDVNIVPSEENPAADFIKSNPPNTIVKGKVKTVHPNIAFIELG
PNVEGIVKKQDMSWLKNARSEELLTPGEEKEFMVLGLDGKKVKLGLKQLTQNPWSVIPER
YKPGQQVELTVKEVRPFGTFLGLPEGVDGLLPISEIPKNTNLEPGQKITVKVLEVNPKEE
KITFSMIQETKKQQKEQGDQKEFIKVNDSSSGFKLGDILKTKLK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagagtttgaagagttattaaaagctcaaaaggagcagttttccacaggaagc
gtagtaaagggttctgtggtaaaaattacagattcaaacgtgtacttggatataggttat
aaaatagaaggcgttataaggcggtatgaagtaggtgatgttgagataggccaagaaata
gaggcggttattgtaaagttaagaggacttgaaaatccaatactttccacgaaaccttta
aaatcttttaaaggattttctatagccaaaaaagcgttagaagaaaaaacacctatagag
gtgacggtagaatcaaaaggaagaccaggattttttgtacaacttgaagatattagggct
ttgatgccttttggtgaagctccaaggcatgtaaatataggagacaaaataaaggtattg
gtaacaaaagccacctatgaaaacggaaaacctatagtaaacgtatcttacaaagagtat
gagaacattgaaaggcatcaaaaacaacttgaatttataaactcgttagaagtaggctct
acgatagaaggaaaagtaataaaaatagaccctgaaaagggtattacagtgcttttaaaa
gaaggggttagaggcttcgtaccgcattacgaaataccaaaaggtacaaatgtaaaagaa
aacgatacgctagaagttagagttataaaaaaagccaaaaaaggcaattttattatatta
agcctcaaaaaaccaaagaagaatatattggaaacgctagagttaaaagagggagacaaa
acagagggcaaagtatctttctacaaaaaaggaaaaggacttttcgtagaattaaaagaa
ggtattatagccttggtaccagaagaaagcatgaaagacattggtaagcctctaaagaat
ggcacaaaattaaagcttgttgtaacaagaatagacaaagacaaaaaacaaatagatgta
aacatagtaccttctgaagaaaacccagcagcggattttataaaatcaaacccaccaaat
acgatagtaaaaggaaaagtaaaaaccgtacatccaaacattgcgtttatagagctaggg
ccaaacgtagaaggcatagtgaaaaaacaggatatgtcttggcttaaaaacgcacgttca
gaggagctacttacccctggtgaagaaaaagagtttatggtactaggactagacggcaaa
aaagtaaagcttgggttaaaacagcttactcaaaatccttggagtgtaataccagaaagg
tacaaaccaggacaacaagtagagcttacggtaaaagaagtaagaccttttggtaccttc
ttaggtttgccagaaggcgtagatggtctattgccaatatctgaaatacctaaaaataca
aacttagaacctggtcaaaaaataacggtgaaggtcttagaggtaaatccaaaagaggaa
aagattactttcagcatgatacaagaaaccaagaaacagcaaaaagagcaaggcgaccaa
aaagagtttataaaagtaaacgactcttcgtctggctttaagcttggtgatatccttaag
accaagttaaagtga
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