Hydrogenobaculum sp. HO: HydHO_0246
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Entry
HydHO_0246 CDS
T02482
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hho02044
]
HydHO_0246
02035 Bacterial motility proteins [BR:
hho02035
]
HydHO_0246
Secretion system [BR:
hho02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HydHO_0246
Bacterial motility proteins [BR:
hho02035
]
Pilus system
Pilus assembly proteins
HydHO_0246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_16
AAA
AAA_14
nSTAND3
ATPase_2
AAA_7
ResIII
AAA_11
ABC_tran
cobW
AAA_30
SRP54
DUF87
Zeta_toxin
AAA_29
AAA_23
NACHT
MAP
AAA_19
NB-ARC
TraC
NPHP3_N
FtsK_SpoIIIE
MobB
DEAD
HerA_C
DO-GTPase2
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AGG14582
UniProt:
M1R5V2
LinkDB
All DBs
Position
complement(213749..215428)
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AA seq
559 aa
AA seq
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MPDIERNLRFLKFLQNEGLIDDNTVKELKDLDIDIVSYLVETKKITEQDLLNAYSKMFKL
VDKDGSVVNIDKIDKNLLNLFPQDFIVKNKIIPISMSDNSVTVATYMPYIDENQIKYITK
KPNVITWYTTPSKIKNIIENLFHSGSIDLNAEEVYIEAQQEYNINIEKLVEQSSESAIVK
LADSILYRAVKDGASDIHIEPQEKEIVLRFRIDGMLKKIDTYPTNIKDPLVSRFKILANL
DISERRKPQDGIIKIRISNKKVQLRVSTLPTIFGEKLVMRVQFPDEFSALKLETLGFEED
EVKKLKQTYTKPYGIILVVGPTGSGKTTTLYSILQDLNKEDVNIVTAEDPVEINIPGLNQ
VQIDEKVGRTFEAVLRSFLRQDPDIMLVGEIRDAITAEIAIKSSLTGHLVLSTLHVNDAP
STVARLIDMGIEPFLISSSLLAVSAQRLVRKLCPHCKIPYEPTKEEREYYGITADVIYKP
NKQGCEYCNHLGYKGRTVIAELMFADNEIREAINQRKTTEEIREIAIKKGMKTLFQSGII
KVNKGITSLEEVLRVSIQD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgccggatatagagaggaacttaaggtttttaaaatttttacaaaatgaagggctcata
gatgacaatacggtaaaagagttaaaagacctcgatatagacatagtaagttatcttgta
gaaactaaaaaaataactgagcaagatcttcttaacgcgtattcaaaaatgtttaaactt
gtagataaagatggtagtgtagtaaatatagataaaatagataaaaatcttttaaactta
tttcctcaagattttatagtaaaaaataaaataatacctatttctatgtctgataatagc
gttacagttgctacatacatgccatatatagatgaaaatcaaataaagtacattaccaaa
aagccaaatgtaataacctggtatacaacgccgtcaaaaataaaaaatattatagagaat
ctctttcattctggatctatagacttaaacgcagaagaagtatatatagaagcacaacaa
gaatacaatatcaatatagaaaaattagtagaacaatcaagcgaaagtgcaattgtaaag
ttggctgattctatactctatagagctgttaaagacggtgcttctgatatacatatagag
cctcaggaaaaagaaattgttctaagatttagaatagatggaatgctaaaaaaaatagac
acttacccaacaaatataaaagacccgctcgtatctaggtttaaaatattggcaaacctt
gatatatcagaaaggagaaagccccaagacggaatcataaaaataaggatatcaaacaaa
aaggtgcaactaagagtatcaacgcttcctacaatatttggtgaaaaattagtcatgaga
gtgcagtttcccgatgagttttcagctttaaaactagaaacgcttggatttgaagaagat
gaagtgaaaaaactaaagcaaacttacactaaaccttatgggataatactagtggtagga
cccacaggtagcggaaaaactacaacgctttattcaatactacaagacttaaacaaagaa
gatgtaaacatagtaaccgccgaagaccccgtagaaataaatataccagggcttaatcaa
gttcaaatagatgaaaaagtaggaaggacttttgaagcggttttaagatcgtttttgagg
caagacccagatattatgcttgtaggtgaaataagagatgccataacagctgaaatagct
ataaaatcctctcttactgggcacttagtcttatcaacgcttcatgtaaacgatgcacca
agcacagtggcgaggcttatagatatgggaatagaaccatttttaatatcatcttcactt
ttggcagtatctgctcaaaggcttgttagaaagttatgtccacactgcaaaataccatat
gagcccacaaaagaagaaagagaatattatggcatcactgctgatgtaatatataaacca
aacaaacaaggttgtgaatactgcaaccacttaggttataaaggaagaactgtaatagca
gaactaatgtttgcagataacgaaataagagaggctataaaccaaagaaaaaccacagaa
gaaataagagaaatagctattaaaaaaggtatgaaaaccttgtttcagtctggtataata
aaagtaaacaaaggaattacatctttagaagaggtgttaagagtgtctatacaagattaa
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