Hydrogenobaculum sp. HO: HydHO_0473
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Entry
HydHO_0473 CDS
T02482
Name
(GenBank) condensin subunit Smc
KO
K03529
chromosome segregation protein
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hho03036
]
HydHO_0473
Chromosome and associated proteins [BR:
hho03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HydHO_0473
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_13
AAA_29
Fn3_Dep-1_1st
Motif
Other DBs
NCBI-ProteinID:
AGG14805
UniProt:
M1RS12
LinkDB
All DBs
Position
complement(406170..409616)
Genome browser
AA seq
1148 aa
AA seq
DB search
MGNAYIEKIVVTNFKSYGTEKLEIPIGEGFVGIVGPNGAGKSNIGDAISFGLGLSTSKTM
RAKNLTHLIYSKQGQREDFAQVDVHFSNPQIFGYDEFVVTRIIYKDGKSLYKLNGKIIRE
KDLHLILARGGIYKEGYNIVLQGDIVKFVKMTPLERRKIIEDVAGISEYEQKRQFALEEL
GEADIKIRELKPLVEELEANLEKFEKEKERLRQYKALMEKKHILECVLLLKEKQNLLKDL
QKTSEEKEALETKSSKLLETIDIKTKELKDVEQKITNLQETLLPYRESSGKLSAKIEYIK
EQKALKEKELKKELSHKEDIEKKIDFLQKDLLNLEKELLEVEQEKLSKEKEIYNIEHIIK
EKEKELKSTEEKLNLSPEEIEQIEKKEKELKSILEQKKKQYQQYIDQIQDISQKQNRYKD
DIQRLKADLQALEQKDSVEEKLKTFQKNIEEARLSIEAIQQTIAKYTSSLTETKKEIEQI
ISEKARIESQLRYNDDDTYIFQNIKGVYGKVEDLISLKDEEYKTAIEAAAGARLSYVVVE
SEEVAKTCIELLKKNSDKRVSFIPLNRIKTQSLPPYPRQRGYIDFALKLVDYDKTLEPAI
SFVFGDTLVVESFDVAKSLQNYRCVTLEGEVFEKTGVITGGKAKQHSNIGKKALLEKLES
LNEKYNLLKEKEQQLDQNISKAKSTLIEKEGIIAINTKYIKDLENQKKDTLLQKSNILER
IKSGEEYIEHLENKKKELLEMLEPLKEEIKYIEEKLTNLELRKKDILSYYTSKEIKELKD
SIEYYKKLHLDKTKELNTVELKKNDISKNIEYVKSSIDQKKQELIGAHSQIKSLEQELMS
LELELKSAEEELKESNAMFYKLYEEKELLEKEQKNLQSELGGLKLEHERLLEEIGSLSND
ITRIQTKIESINEALKEKEYDGTIYEEQNQSASKLKEELERTKKLLESMSDINLKAEEEY
EETLNRLKDYKEKLDQLIKDKQAIKAMIEEIDRKKYSAFMEAFNNIRKNFKEIYAKVSYQ
GKADLSLDNEEDPFSGGVSIFVKPRGKDVQYVEAISGGEQTLAAISLIFAIQEYKPSVFY
YFDEIDAHLDEANAYLLGQMIKEKSKNVQFIVVTLRENLANFADKLIGVTNKDGISKTLT
FKSLKEVS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcctatatagaaaaaattgtagttacaaactttaaatcctacggcacagaa
aaactagaaataccaataggggagggctttgtagggatagtggggccaaacggtgctggc
aaatcaaacataggtgatgccatatcctttggtcttgggctttccacatcaaaaaccatg
cgggctaaaaacctcacacaccttatatattcaaaacaaggccaaagagaagattttgca
caggtggatgtacacttttcaaacccacagatatttggatacgatgagtttgtagttaca
aggattatctataaagatggtaaaagcttatataaactaaacggcaaaattataagagaa
aaagatttgcatctaatacttgcaagaggtggcatatacaaagaaggctacaacatagta
ttacaaggagatatagtaaaatttgtaaaaatgacacctttagagcgaagaaaaataata
gaagatgtagcaggtataagcgaatacgagcaaaaaagacagtttgctttagaagagcta
ggagaagctgatataaaaataagagaactaaaacccttagtagaagaactagaggcaaat
ttagaaaaatttgaaaaagaaaaagaaaggctccgtcaatacaaagctttaatggagaaa
aaacatatacttgagtgtgttttgcttttaaaagaaaaacaaaaccttttaaaggactta
caaaagacttccgaggaaaaagaagctttagaaactaaaagctcaaaacttttagaaacc
atagatattaaaaccaaagaactaaaggatgtagaacaaaaaataacaaacttacaagaa
acccttcttccttacagagaatcttctggtaagctatctgcaaagatagaatatataaaa
gagcaaaaagccttaaaagaaaaagaactaaaaaaagagttatcccataaagaagatatt
gaaaaaaagattgattttcttcaaaaagatttacttaatctagaaaaagagcttttagaa
gtagagcaagaaaaactttcaaaagaaaaagagatttataatatagaacatataataaaa
gaaaaagaaaaagaattaaaatccaccgaagaaaagctaaacctttcaccagaggagata
gaacaaatagaaaaaaaagaaaaagaattaaaatctattttagaacaaaagaaaaaacaa
taccagcaatatatagaccaaattcaagatatatcccaaaaacaaaatagatacaaagac
gacatacaaagactaaaagccgatttacaagcgttagaacaaaaagactctgttgaagaa
aaattaaaaacattccaaaaaaatatagaagaggcaagactttctatagaggcgatacag
caaactatagccaaatatacaagttctttgacagaaacaaaaaaagaaatagagcaaatc
atatcagaaaaagcaagaatagagtctcagcttagatacaacgatgatgatacttatata
ttccaaaatataaaaggtgtttatggtaaagtagaagatcttataagcttaaaagacgaa
gaatacaaaacagctatagaagctgcggctggggctaggctttcttatgtggttgtagaa
tctgaagaagtagcaaaaacttgtattgagcttttaaaaaagaactctgataaaagagta
agctttatacccttaaaccgtataaaaacccaaagtttaccaccttatccaagacagcgc
ggatatatagactttgcactaaagcttgttgattacgataaaacattggagcctgccata
agctttgtttttggtgatactcttgtggtagagagctttgatgtggctaaaagcctacaa
aactatagatgtgtaacattagaaggagaggtatttgaaaaaaccggtgttataacagga
ggaaaagcaaaacaacactcaaacatcggcaaaaaagcccttttagaaaaactagaatct
ttaaacgaaaaatataacctcttaaaagaaaaagaacaacaactcgatcaaaacattagc
aaagcaaagtctactctcatagaaaaagaaggcataatagcaataaatacaaagtatatc
aaagatttggaaaatcaaaaaaaagatacgcttttacaaaaatcaaatatattagagcgt
ataaaatctggtgaagaatacatagagcacttagaaaacaagaaaaaagagttattggag
atgttagaacctttaaaagaggagataaagtatatagaagaaaagcttacaaacttagaa
cttagaaaaaaagatatactttcatactatactagcaaagagataaaagagcttaaagat
agcatagaatattacaaaaagcttcatttagacaaaacaaaagaactaaacaccgtagaa
ctaaagaaaaatgacatctcaaaaaatatagaatatgtaaaatcctctatagaccaaaaa
aagcaagaacttattggagctcattctcaaataaagagtttagaacaagagctaatgtct
ttagaacttgaactaaaaagcgcagaagaagagttaaaagaatcaaatgcaatgttttat
aagctttacgaagagaaagagcttttagaaaaagagcaaaaaaatttacaatcagaacta
ggtggtcttaaactagagcacgaaaggcttttggaggagattggctctttatcaaacgac
atcacaagaattcaaacaaagatagaatctataaacgaagctctaaaagaaaaggagtac
gacggtaccatctacgaagagcaaaaccaaagcgcttcaaaattaaaagaagaattagag
cgtaccaaaaaacttttggagagcatgagcgatataaatctaaaagccgaagaagaatac
gaagaaaccctaaacagattaaaagactacaaagaaaaattagatcaactcatcaaagac
aagcaagcgataaaggctatgatagaggagatagatagaaaaaagtacagcgcttttatg
gaagcttttaacaacataagaaaaaatttcaaagaaatatacgctaaagtatcttatcaa
ggaaaagcggatttatctttggacaacgaagaggacccattttctggcggtgtttctata
tttgtaaaaccaagaggaaaagatgtgcagtacgtagaagcaatatctggaggagaacaa
acattagcggcaatatctctaatctttgctatacaagagtataaaccatcggtgttttat
tactttgatgagatagatgctcatttagacgaggcaaatgcatatcttcttggccagatg
ataaaagaaaaatcaaaaaatgtgcagtttatagtggtaaccctcagagaaaacctagca
aactttgcagacaagcttataggagtaaccaacaaagacggtatttcaaaaacccttacc
ttcaaatctttaaaagaagtgtcttaa
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