Hydrogenobaculum sp. HO: HydHO_0516
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Entry
HydHO_0516 CDS
T02482
Symbol
gpsF
Name
(GenBank) Type II secretion system F domain, GpsF
KO
K02653
type IV pilus assembly protein PilC
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hho02044
]
HydHO_0516 (gpsF)
02035 Bacterial motility proteins [BR:
hho02035
]
HydHO_0516 (gpsF)
Secretion system [BR:
hho02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HydHO_0516 (gpsF)
Bacterial motility proteins [BR:
hho02035
]
Pilus system
Pilus assembly proteins
HydHO_0516 (gpsF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
AGG14847
UniProt:
M1R6I1
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All DBs
Position
complement(448406..449614)
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AA seq
402 aa
AA seq
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MPKFQYVAYTKDGKVEKGVIEAQNQDVIAQILSSKELIPVSIELAKERTLSFSFGKKVKE
KELSLVLRQLGFLIQVGISVPQAFEMAAKQIHNKYFQKTLLEVAKDVSEGLTVGQAMQKR
KNVFPPLLISLVITGEETGQLDRSLILASEYYEKLAKIKGKIKSASFYPSFVLIIATIIT
TAIIYFLVPIFASIYKGFGASLPLPTLMLLKASNFLHENILKFVILLFISGFVFKRLYQN
NMKFKKRIEKTLLKLPVLGNVFHKIMMNSFATSLSSLFSSGVSLDRSMELISQTSTMQIV
KEGIEKASKSVKEGKPLWLSLKETGLFDDLFISMVKIGEDTGRLDDLLQSIVRFYEDEVD
KAIDAMISLIEPTMIVIIGGIIGVILIALYMPIFKIGSLIKS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatttcaatatgtagcttatacaaaagatggtaaagtagaaaaaggcgttata
gaagctcaaaatcaagatgtgatagctcaaatattatcttccaaagaacttattcctgta
tctatagagcttgccaaagagagaactctttctttttcctttggtaagaaagtgaaagaa
aaagaattatctttagtattgcgacagcttgggtttttaattcaagtaggtataagtgta
ccacaagcttttgaaatggcagcaaaacaaatacataacaaatattttcaaaaaacgctt
ttagaagttgctaaagatgttagtgaagggcttactgtaggtcaagcgatgcaaaaaaga
aaaaatgtttttccaccgcttcttataagtctagtaataacaggagaagaaaccggacag
ctagatagatcactaattttggcttcagaatattatgaaaaattagctaaaataaaaggt
aaaataaaaagcgcttctttttatccttcttttgtacttataatagccaccattataaca
acagccattatttactttttggtaccaatatttgctagcatatacaaaggtttcggcgca
tcgctacctctccctacgttaatgcttttaaaagcttctaattttttacatgaaaatata
ttaaaatttgtaattcttctttttatttcaggttttgtttttaagcgcctttatcaaaat
aatatgaagtttaaaaaacgaatagaaaaaacactgttaaaactacctgttttaggcaat
gttttccataaaataatgatgaactcctttgctacatcgttatcgtctttgttttctagc
ggtgtgtctttggatagatctatggaattaatatctcaaactagcacaatgcaaatagta
aaagaggggatagaaaaagcctctaaatctgtaaaagaaggaaaaccgctatggctatct
ctaaaagagacagggctatttgacgatctttttatatctatggttaaaataggcgaagac
accggacgccttgatgatttgttacaaagtatcgtaaggttttacgaagacgaagtagat
aaagcaatagatgctatgatatctttgatagagcctactatgattgtaataataggaggt
ataataggtgttatattaatagctctatatatgccaatatttaaaataggctcgttgata
aaatcttaa
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