Hydrogenobaculum sp. HO: HydHO_0769
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Entry
HydHO_0769 CDS
T02482
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hho03400
]
HydHO_0769
DNA repair and recombination proteins [BR:
hho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HydHO_0769
Archaeal homologous recombinant proteins
HydHO_0769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
GAD
MAAL_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGG15090
UniProt:
M1RSQ4
LinkDB
All DBs
Position
complement(692582..695467)
Genome browser
AA seq
961 aa
AA seq
DB search
MRPLVLELEGFLSYKEKTVIDFSDLSLFAITGMTGAGKTTIIDAITFALYGKCPRFEKGA
SKEDYISKGKDFFRVSLTFSLNDKTYTVGRYLKSGKNIVVSLKENGKEIITEEKNKLREE
RIKEILNMDYDTFTKVIVLPQGEFAKFIKPESPQERREIIMRLSNLDKIDKMRELAASQK
KDLKNEIDSILLMIDNLKSTQENVEELQKKLDSLEQELSVKTSEKKVLLEKLSKAKKKQE
LKTELNKLTAEYENLENQKEKMELIKKRIEFLKPKLSLKSDIERYIKLKNELEKTALEFD
KKNKEYFLKEQEYNKLLMNFETIKADYEQTKYQEERVERGYKIISILENALSIESYITND
ETRIRDLEQQLKIKKGERSTLLAEIEHYENLSKEVDKEAIEKDIENITMMMSQLELKEKE
KNKKLLEQKKLMEEVDDINKEILKYKEEQKELDQELNANKNNIVLYYSNMLKTLLKENDT
CPVCGGVYHEKEHTTMLDIEIEEDIIKNIEDIKRKIALLEDRLKSKKEALEKLSEEIESL
EKELLEKEILQSRLKELKQRREFQDNIQKNLEKLTSKKDKLENEILLLNKQKEALEKDLY
SKKESLKTLEKELLSYGVKEGHLQNKKNAIDQYKNKLDEIKKEIQDKRKIYEDTKEMINT
YEKSIMLLKEQVSSLSAKKTTISEELNELETKLSSIEDKEKVLEELNRLENYERTYNEYI
LKLSNLKEQIKLKENEIANITEEAPPQELENMLEVLEEYVKTLNQEIGSISSKINQAKEN
EKQIKELEETIKDLEKKYNIYERLEQDLKSDALQAYISQKIIEELVKYANVYASKMEFLY
SFKVEEKSREKDSIVVEDAFGNTRPIKSLSGGETFITSLCFALALSEAVGSQNLKSLFID
EGFGTLDKETLEKVGNALELLSQNINKMVGIITHVESLAEKFPNRLIVTKTKDGISKIEV
V
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagacctttggtattggagttagagggttttttgtcttacaaggaaaaaactgttata
gatttttctgatctttctttgtttgccatcactggaatgaccggagctggcaagaccacc
ataatagatgctatcacatttgccctttacggtaaatgcccaagatttgaaaaaggagct
tctaaagaagactacatatcaaaagggaaagatttttttagagtatccttaacattttct
ttgaacgataaaacatacaccgtgggaagatatttaaagagcggtaaaaatatcgtagtt
tctttaaaagaaaatggaaaagaaataattacagaagaaaaaaataagctaagggaagaa
cgaataaaagaaatattgaacatggattacgatacttttacaaaagtgatagttttgccc
caaggagaatttgcaaagtttattaaaccagaaagcccacaagaaagaagagaaataata
atgagattaagcaatttagataaaatagataaaatgagagagcttgcagcttctcaaaaa
aaagatttaaaaaatgaaatagattcgatattgctaatgatagataacttaaaatctact
caagaaaatgtagaagagcttcaaaagaaactagattctttggagcaagagcttagtgtt
aaaacttcagaaaaaaaagttttattagaaaagcttagtaaagccaaaaaaaagcaagaa
ttaaaaaccgaactaaacaaactaacagccgaatatgaaaatctagaaaaccaaaaagag
aaaatggagcttatcaaaaaacgtattgagtttttaaaaccaaaacttagcctaaaatca
gatatagaaaggtatataaagttaaaaaacgaattagagaaaacagcgcttgagtttgat
aaaaaaaataaagagtattttttgaaagaacaagaatacaacaaacttttgatgaatttt
gaaacaataaaagccgattacgaacagacaaaatatcaagaggagcgcgtagaaagaggc
tataaaataatatcgatattagagaatgcattatcgatagaatcttatataacaaacgat
gaaactagaataagggatcttgaacagcagttgaaaattaaaaaaggagaaagatcaaca
ttattagctgagatagaacactatgaaaatctctcaaaagaagtagataaagaagctatt
gaaaaagatattgaaaatattacaatgatgatgagtcaattggagttaaaggaaaaagaa
aagaataaaaaactattagaacaaaaaaagctaatggaagaagtagatgatataaacaaa
gagattttaaaatacaaagaagaacaaaaagaattagatcaagagttaaacgccaacaag
aataatattgtcttatattatagcaacatgttaaaaacccttttaaaagaaaacgatact
tgtcctgtttgtggtggtgtttatcacgaaaaagaacatactacaatgctagatatagaa
atagaagaagatatcataaaaaatatagaagatattaaaagaaaaattgctttgttagag
gatagactaaaatcaaaaaaagaagcgttggaaaaactttcagaagaaatagaaagcctt
gaaaaggaattgttggaaaaagagattttacaatcaagattaaaagaattaaagcaaaga
agagaatttcaggataatatacaaaaaaatctagagaaattaacaagcaaaaaggataag
ttggaaaatgagattttgcttttaaacaaacaaaaagaagctttagaaaaagatttatac
agcaaaaaagaatctttgaaaactttagaaaaagagcttttatcttacggtgttaaagaa
gggcatttgcaaaataaaaaaaatgctatagatcaatataagaataagttagatgagata
aaaaaagaaatacaagacaaaagaaagatatacgaagataccaaagaaatgataaatact
tatgaaaaaagtatcatgcttttaaaagaacaagtatcttctttgagcgccaaaaaaact
acaataagcgaagaactaaatgaacttgagacaaaattgtcttctatagaagataaagaa
aaagtattagaagagttaaatcgtttagaaaattatgaaagaacatacaatgaatatata
ttaaaattgtccaatttaaaagaacagataaaattaaaagaaaatgaaatagcaaacata
acggaagaagcaccaccccaagagttggaaaacatgttggaagtcttagaagaatatgtg
aaaacgctaaatcaagaaataggttctataagctctaaaataaatcaggcaaaagaaaac
gaaaaacagataaaagagcttgaagaaactataaaagaccttgaaaagaaatacaatata
tatgaaagactggaacaagatttgaaaagcgatgcactgcaagcctatatatctcagaaa
ataatagaagaactggtaaaatacgctaacgtatacgcttcaaaaatggagtttctatat
tcttttaaagttgaagaaaagtctcgtgaaaaagatagcatagtagtagaggacgctttt
ggaaatacaaggcctataaaatctttgagcggtggcgagacttttataacgtctttgtgc
tttgctttagcactcagcgaagctgtgggttctcaaaatcttaaatcacttttcatagat
gaggggtttggtacacttgataaagaaaccctagaaaaagtaggtaatgctttggagctt
ttgagtcaaaatataaataaaatggtaggtattattacacacgttgaaagtttggctgaa
aaatttccaaataggttgatagtaacaaaaacaaaggatggtatctcaaaaatagaggtt
gtatga
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