Hydrogenobaculum sp. HO: HydHO_0782
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Entry
HydHO_0782 CDS
T02482
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hho
Hydrogenobaculum sp. HO
Pathway
hho00061
Fatty acid biosynthesis
hho01100
Metabolic pathways
hho01212
Fatty acid metabolism
hho02024
Quorum sensing
hho04146
Peroxisome
Module
hho_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HydHO_0782
00071 Fatty acid degradation
HydHO_0782
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HydHO_0782
09145 Cellular community - prokaryotes
02024 Quorum sensing
HydHO_0782
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hho01004
]
HydHO_0782
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hho04147
]
HydHO_0782
Enzymes [BR:
hho01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HydHO_0782
Lipid biosynthesis proteins [BR:
hho01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HydHO_0782
Exosome [BR:
hho04147
]
Exosomal proteins
Exosomal proteins of breast milk
HydHO_0782
Exosomal proteins of breast cancer cells
HydHO_0782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
AMP-binding_C_3
PP-binding
AMP-binding_C
DUF7080
PH_SPO71
Motif
Other DBs
NCBI-ProteinID:
AGG15103
UniProt:
M1QIQ8
LinkDB
All DBs
Position
710789..713266
Genome browser
AA seq
825 aa
AA seq
DB search
MFLRFYDKTAFIYKGKNISYKELIDKAEFYSAAIDIIPGDRVVIFSENKPEWAYALFGIW
RRGGIAVPIDHMASEDEVAFIIQDARPTYAFVSSDLKYTFAKAVKRHRYKVEVIDIEDFI
PFQDPKEPITNISEDIALILYTSGTTGQPKGVMLTFGNLQSNIEAIAKENIASSKDVTIA
LLPFHHAYPLMVSLLVPIYLGATIIFSENLSSSSLVNLIVANKVTALIGVPKLYKILHDK
IFGEINNIPVAKKLFSFVDFVGSPKLGKIIFKKVHKSFGGNLKYFISGGAKLDPNIAHDL
YMLGFDVLEGYGLTETSPIVSFNVPGSIKIGSVGKPIPGVEVKIAEDGEVLVKGKNVMKG
YWQRPDLTNEAIKDGWFYTGDIGYLDEDGYLYIIGRKKELIVLENGKKVIPEEIENLILS
KSDIVKEVAVIEQNGHLHAIIVPNFELVKEKGILNLREYITWEVIDKVNRELPSYKNITD
FSIREEELPKTRLGKIKRFLLKAQDNVPLKAKEQTYKEEEEKKPIGILTEQEGILLDYLR
RYKSDISPKDHIEIDLGLDSLDKVELLSFLDKTFGIQIPEKELSKYLSVEQLMSLVLDKE
AKQTKEVNWHDILSETAPAETLEYKDEVLVYGSYLLRQIFKVYFRFQVEGLPNLPKENPF
IIAPNHASYLDGFLIAASLPKELIKDTYFVGAKEYFEGKIGDIIAKHFHVIPVDTQSSVK
ETLIKSAAILKSKKNLVIFPEGARTRNGKLLPFKKGVAILSKELKVPIVPTAIKGSYEAM
KIGDIFPKPKKIVVRYGWPLLYYEFSYDEIIGRLEEAVQSLLNLP
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaagattttacgataaaaccgcttttatatataagggtaaaaacatatcttac
aaagagttaatagacaaagcagaattttacagtgcagctatagatataataccaggagat
agagttgtcatattctctgagaacaaaccagaatgggcttatgctctttttggtatatgg
agaagaggaggcatagcggtgcccatagaccatatggcttccgaagatgaagtggcgttt
attattcaagatgcaagaccaacttatgcttttgtgtcaagtgatctcaaatatactttt
gcaaaagccgtaaaaaggcatagatataaggtagaggtcatagatatagaagattttata
cctttccaagatcctaaagagcccatcacaaacatttctgaagatatagctcttattctt
tatacctctggcaccaccggacaacctaaaggtgttatgcttacatttggaaaccttcaa
tctaacatagaggctatagctaaagaaaacatagcttcttcaaaagacgttacaatagct
cttcttccatttcaccacgcttatcctctcatggtatctttattggtgccaatttatctt
ggagctacaattatatttagcgaaaacctttcttctagttcgttggtaaatttaatcgtt
gccaacaaagtaactgctcttattggggtaccaaagctttacaaaatattacacgacaaa
atatttggagagataaacaatattcctgtagcaaaaaagttgttttcctttgtagatttt
gttggtagtccaaagcttggtaagattatttttaaaaaagttcacaaaagctttggaggt
aatctcaaatattttataagtggcggggctaaattagatccaaatatagcacatgatctt
tatatgcttgggtttgatgtattggaagggtatggtcttactgagacatcgcctatagta
agcttcaatgtacctggcagtataaaaataggctctgttggaaaacctattcctggggta
gaagtgaaaatagcagaagatggcgaggttttggtaaaaggaaaaaatgttatgaaaggt
tattggcaaagacctgaccttacaaacgaagctataaaagatggctggttttatactggt
gatataggttacctagatgaggatggttatctttacataataggtaggaaaaaagaactt
atagtgcttgaaaacggcaaaaaagtaataccagaagaaattgaaaaccttattctttcc
aaaagcgatatagtaaaagaggtggctgttatagaacaaaatggacatctacatgccata
atagtaccaaattttgagttggtaaaagaaaaaggtatattaaatctaagagaatatata
acttgggaagtgattgacaaggtaaaccgtgaattgccttcttacaaaaatataactgat
tttagcataagagaagaagagctcccaaaaacaagacttggaaagataaaaaggtttttg
ttaaaagcccaagacaacgtaccattaaaagctaaagagcaaacttataaagaagaagaa
gaaaaaaaacctattggtatattgacagaacaagaaggaatattgcttgattatctaaga
agatacaaaagcgatatatctcctaaagaccacatagagatagatcttggtttagattct
ttggataaggtggagcttttaagctttttagacaaaacctttggtatacaaataccagaa
aaagaactctctaaatatttatctgtagagcaactaatgagcttggtattagacaaagaa
gctaaacaaacaaaagaagtaaactggcatgacatactaagcgaaaccgctcctgctgaa
accttagaatacaaagacgaagttttagtatacggttcttatttgctaagacaaattttt
aaagtctattttaggtttcaagtggaaggcttaccaaatctcccaaaagaaaatccattt
attatagcaccaaatcacgctagttatttagatgggtttttaatagcagcttccttacca
aaagaactaataaaagatacatattttgtaggagcaaaagaatactttgaaggcaaaatt
ggagatatcattgccaaacattttcatgttataccagtagatacccaatcaagtgtcaaa
gaaacacttataaaatctgcagctattttaaaaagcaagaaaaatttagttatatttcca
gaaggagctagaactagaaacggtaaactacttccctttaaaaaaggtgttgctatattg
agcaaagaacttaaagtacctattgtcccaacggccataaaagggtcttacgaggctatg
aagataggtgatatatttccaaaacccaaaaagatcgttgtaaggtatggatggcctctt
ttatattacgagttttcttacgatgaaatcataggaaggttggaagaagcggtgcaatct
cttcttaatttaccttaa
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