Hydrogenobaculum sp. HO: HydHO_0839
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Entry
HydHO_0839 CDS
T02482
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hho03400
]
HydHO_0839
Enzymes [BR:
hho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HydHO_0839
DNA repair and recombination proteins [BR:
hho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HydHO_0839
Prokaryotic type
HydHO_0839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AGG15159
UniProt:
M1RJZ7
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All DBs
Position
complement(781034..782401)
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AA seq
455 aa
AA seq
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MEPEFTGRVKALNDRQFNQSGKYIIYWMSHSHRANFNHSLEYAINLSNDYKKPLLVYFPI
TDKCRYSNARYYKFMLDGVLEAKKSIEERGIRFIIEKSDDIKRRVIEISKNANALITDKA
YLKYYRKLNSDIAKKLDIPFYEVESDVCVPVEIVSQKQEVYAFNIRKKIYDVLGSYLLKL
KPREPKIKSINLDFGMEEITLNNSLKILDILNIDKSISLSPFIGGYSQAKRYLEEFIEKK
LHKYKDYRSHPELDYQSNLSPYLHFGQISPLEVVFETLSKYKRDENVDSFFNELIVWREL
ARNFCYYNPNYNHYEGIPDWAKKTLEEHKNDKRDYVYTLEEFENAKTHDEYWNAAQLELL
KTGKMHNYMRMYWCKKIIEWTQGPKHAFDIACYLNDKYELDGRDPNGYAGISWCFGTHDR
PWKERKIYGKIRYMSVSGLESKFDIKKYVEKIKSL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagaattcacaggaagagtaaaagctttaaacgacagacagtttaatcaatca
ggtaaatacataatatactggatgtctcacagtcatagagcaaactttaaccacagtctt
gaatatgcaatcaacctatcaaacgactacaaaaaaccattattagtctattttccaatt
acagacaaatgcagatactcaaatgcaagatactacaaatttatgttagatggagtttta
gaagccaaaaagtccatagaagaaagaggtataagatttatcatagaaaaatcagatgat
atcaagcgaagagtcatagagatatcaaagaatgctaatgccttaatcacagataaagcc
tatttaaagtattatagaaaacttaatagtgatatagcaaagaaattagatataccattc
tacgaagtagagtctgacgtttgtgttcctgtagaaattgtatctcaaaagcaagaagtt
tacgcttttaatataagaaaaaagatttacgatgtattaggatcatatcttcttaaatta
aagccaagagagccaaagattaaatccattaatcttgattttggaatggaggagataact
ttaaataactctttaaagattttagatattctcaacatagataaaagcattagtttatca
ccttttataggtggttatagccaagcaaaaagatatttagaagaatttattgaaaagaag
ctgcataaatataaagattataggtctcatccggagcttgactatcaatcgaaccttagt
ccttatctgcactttggacagatttcaccgttagaagttgtttttgaaaccttgtcaaag
tataaaagagatgaaaacgttgatagcttttttaacgaactgatagtttggagagagctt
gcaaggaatttttgctattataacccaaactataatcactatgaaggcattccagactgg
gctaaaaaaacattagaagagcacaaaaacgataaaagagattatgtttatacattagaa
gagtttgaaaatgcaaaaacgcacgatgagtattggaacgctgcacagttggagctttta
aaaactggaaagatgcataactacatgagaatgtactggtgtaaaaaaattatagaatgg
acacaaggcccaaaacatgcctttgatatagcatgctatctaaacgataaatacgagctt
gatggaagagatccaaacggttatgctggcatatcgtggtgctttggaacccatgacaga
ccatggaaagaaagaaaaatctatggaaaaataagatatatgagtgtatcaggcttagaa
tcaaagtttgatattaaaaaatatgtagaaaaaataaagagtttataa
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