Hydrogenobaculum sp. HO: HydHO_0922
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Entry
HydHO_0922 CDS
T02482
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hho03016
]
HydHO_0922
Enzymes [BR:
hho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HydHO_0922
Transfer RNA biogenesis [BR:
hho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HydHO_0922
Prokaryotic type
HydHO_0922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
AmiA-like
PTM_DIR17_Tudor
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AGG15241
UniProt:
M1RDR5
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All DBs
Position
complement(859657..860481)
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AA seq
274 aa
AA seq
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MDGFYIGYKPVGISSSKFVLDISKSLNTKAGHTGTLDLEAEGIMIVALGQATKYTQYFNV
LPKTYEAKGILGIKTDTQDISGNVIQKIENVNITCEELKSTIEKFKGKITQIPPIYSAKK
INGKKAYKLARKNQVQSIELKPITVNIYSIELLECDIPKFYIKAVVSTGTYIRTLINDIG
DTLKVGATTLIIKRTAIGKFDNESVGKVYSIEEGLYFIPSLVLDHSFIKSLKQGKILTYQ
SQDGMYKILGEDGTFQGLAQIKNNLLKAVRMQSQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatggtttttatataggctataagccagttggtatatcgtcttcgaagtttgtactt
gatatttctaaaagcctaaacacaaaagcaggacacactggtacccttgatttagaagca
gaaggtattatgatagtagctcttggtcaagccactaagtatacacagtatttcaatgta
cttccaaaaacttacgaggcaaaaggtatacttggtataaaaacagatactcaagatatc
tcaggaaatgttatacaaaaaatagaaaatgtaaatataacctgtgaagagctaaaaagc
accattgaaaaattcaaaggcaaaataacccaaataccccccatctactccgccaaaaag
ataaacggtaaaaaagcttacaaattggcaagaaaaaatcaagtccaaagcatagagctg
aaacctataacggtaaacatctatagtattgagcttttagaatgcgacataccaaagttt
tatataaaagctgttgtttcaaccggcacttacataagaacgcttataaacgatatagga
gacactttaaaagtgggtgctactacgcttattataaagcgtaccgccataggtaaattt
gacaatgaaagcgtaggtaaggtttattctattgaagaaggtctttattttataccgtct
ttggttttagatcattcttttattaaaagcctaaaacaaggcaaaatacttacatatcaa
tctcaggatggaatgtataaaattttaggggaagatggtacatttcaaggattagcgcag
ataaaaaataatcttttaaaagctgtcagaatgcagagtcaatga
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