Hydrogenobaculum sp. HO: HydHO_1046
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Entry
HydHO_1046 CDS
T02482
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hho03032
]
HydHO_1046
03036 Chromosome and associated proteins [BR:
hho03036
]
HydHO_1046
03400 DNA repair and recombination proteins [BR:
hho03400
]
HydHO_1046
DNA replication proteins [BR:
hho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HydHO_1046
Chromosome and associated proteins [BR:
hho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HydHO_1046
DNA repair and recombination proteins [BR:
hho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HydHO_1046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AGG15361
LinkDB
All DBs
Position
970836..971105
Genome browser
AA seq
89 aa
AA seq
DB search
MTKTELVSYVAQQADITKAKAEKCVNAVFSALAESLKKKERTTIPGFGTFTVSTRKARTG
RNPKTGQEIKIPARTTAVWRPSKELKKLG
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacagaattagttagttatgtggctcagcaagctgacataacaaaggcaaag
gctgaaaaatgtgttaatgctgtattttctgcattggcagaaagcctaaagaaaaaagaa
agaaccacaataccaggctttggtacttttacagttagcaccagaaaagccagaaccggc
agaaacccaaaaactggccaagagataaaaataccagccagaactaccgccgtttggaga
ccttctaaagagctaaagaaattaggttaa
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