Hydrogenobaculum sp. HO: HydHO_1147
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Entry
HydHO_1147 CDS
T02482
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hho
Hydrogenobaculum sp. HO
Pathway
hho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HydHO_1147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hho03400
]
HydHO_1147
DNA repair and recombination proteins [BR:
hho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HydHO_1147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Pox_A32
AAA_22
OB_DEPS-1_1st
AAA_14
DUF848
ATG17_like
IL32
HSCB_C
Motif
Other DBs
NCBI-ProteinID:
AGG15462
UniProt:
M1R8B1
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Position
1057802..1060075
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AA seq
757 aa
AA seq
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MREYELKKLEFHKIKENLKLRTHSVASLEYIENIKPIPKEELLQEQKLVECFMKLLRQRE
NILYSFDDISKSLKKAMIEESVLGIDEILSIYKVLKIIKDVRKFLVDALDRCDLFNKILK
DLGTFQTLEAEIERTIDPSGVVKSEASRDLFEIRKEIKQVEKTITEKLEALFQRPDSDIL
FSEKLITVRQNRYVVPVKTQSVKRIVGIVHGVSSSGFTTYLEPQIVVDLNNKLAVLRTEE
EKEIHLVLKKLTSFIRERANRLLESFNTLVKIDILMAKASFGIEYECSLPSIGDCIELLE
ARNPIMSILSQNPIPVDIILKDKKGLVLTGPNTGGKTVFLKTLGLSYIMFLHAIPIPASP
NSKLPIFDNIFVDIGDEQDISQSLSTFSSHIKNISEILQRSTEKTLILIDELGAGTDPLE
GSALGIAILDYIKKLNAFVVVSTHHTPIKLWAVNSDYYEPATLMFDRDTLRPLYKVLYGT
IGESMGIEVAKRFGIPKEVILEAQKLLGENTLEYQGVMENLNRLVREYQDKMEILEKHRE
ELELLKRKYESLVEEMEKAKEDAWKNAAKEAQNYLEQLKKEAQEFLVGLKEKASLKDFIK
QKQEELKKLEKEEEQQIEVGDWVEFMGGKGRVLEIRQDKAQVMFGDIKAWIKLKDLSKTA
KIPRTHTINISLQKFENKKAGMPEINLTGLSVEEAISKLDKFLDSAFASGVKMAKVIHGV
GVLKKAVTDYLSSSSYVVFYRDAYPKEGGPGTTIVYF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatatgagcttaagaagttagagtttcacaagataaaagaaaatctgaaattg
aggacgcattctgtagcaagtttagagtatatagaaaatataaaacctatcccaaaagag
gaacttttacaagaacaaaagcttgttgaatgttttatgaagcttttaagacaaagagaa
aacatattgtatagctttgatgatatttctaaaagcctaaaaaaagcaatgatagaagaa
agtgttttaggaatagacgaaatacttagcatatacaaagttttaaaaattataaaagat
gtaagaaaatttttagtggatgccttagataggtgcgatttatttaataaaatactaaaa
gatttaggcacgtttcaaaccttagaagctgaaatagaaagaaccatagatccttctggc
gttgtaaaatcagaagcctctagggatctttttgagataagaaaagaaataaagcaagta
gaaaaaactatcacagagaaactagaagctcttttccaaagaccagatagtgatatacta
ttttctgaaaagcttataacagtaagacaaaatagatatgtagtgcctgtaaaaacccaa
agcgtcaaaaggatagtggggatagtgcatggtgtttcttcttctggttttaccacatat
ttagagccccagatagtggtggatttaaacaacaagcttgcagttttaagaacagaggaa
gaaaaagagatacatcttgtattaaaaaaactcacttcttttataagagaaagggcaaat
agacttttagaatcttttaatacgcttgttaaaatagatattctgatggcaaaagcatcc
tttggcatagaatacgagtgctcattgccttctattggcgattgtatagagcttttagaa
gcaagaaatccaattatgagcattttatctcaaaatcctattccagtggatataatttta
aaagacaaaaaagggcttgtgcttacagggccaaacaccggcgggaaaaccgttttccta
aaaacccttggacttagctatatcatgtttttacacgctatacctatacctgcctcacct
aatagcaaactgcctatttttgacaatatttttgtggatataggagatgaacaagacata
tcacagtctttatcgactttttcttctcatataaaaaatatctcggagattttacaaaga
tccacagaaaaaacactgatactgatagacgaattaggagctggcacagacccactggag
ggttctgctcttggtatagcaatccttgattatataaagaagttaaacgcttttgtagtg
gtttccactcatcacacacccataaagctttgggcggtaaattctgattattacgaaccg
gctacgttgatgtttgatagggataccctaagacctctttacaaagtgctttatggtacc
attggagaaagcatgggtatagaagtagccaaaaggtttgggataccaaaggaggttatt
ttagaagcccaaaaacttcttggagagaatactttggaataccaaggtgttatggaaaac
ttaaataggcttgtcagagaataccaagataaaatggaaatattggaaaaacatagagag
gagcttgagcttttaaaaagaaaatatgaatctctcgtagaagaaatggaaaaagccaaa
gaagatgcatggaaaaatgccgcaaaagaggctcaaaactatttggaacaacttaagaaa
gaagctcaggaatttttggttggtcttaaagaaaaagctagtttaaaagattttataaaa
caaaagcaagaagagttaaaaaagttggaaaaagaagaagagcagcaaatagaagtagga
gattgggtagagtttatgggtggaaaaggtagggttttagaaataaggcaagacaaagct
caggtgatgtttggtgatataaaggcttggataaagctaaaagatctttcaaaaaccgcc
aaaataccaagaacccacactataaatataagcttacaaaagtttgaaaataaaaaagca
ggtatgccagagataaatttaaccgggctttcagtagaagaagctataagcaaacttgat
aaatttttagatagcgcttttgcaagtggagttaaaatggcaaaagtaatacacggtgtt
ggagtgcttaaaaaagctgtaacagactatctttcgtcatcttcttacgttgtattctac
agggatgcctacccaaaagaaggtggacctggtaccaccatagtatatttttag
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