KEGG   Hydrogenobaculum sp. HO: HydHO_1171
Entry
HydHO_1171        CDS       T02482                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hho  Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:hho00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hho02048]
    HydHO_1171
Enzymes [BR:hho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HydHO_1171
Prokaryotic defense system [BR:hho02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    HydHO_1171
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD ResIII HD
Other DBs
NCBI-ProteinID: AGG15486
UniProt: M1REG3
LinkDB
Position
1083767..1085974
AA seq 735 aa
MKKILQNLLEERWAKDDGTTIRDHTDKLLENCEKLKNYYKQEIEELMPKGLPYELKERFW
EILKLACEYHDYGKIHCKFQEKLGNKNLKCEKPIKELPEVRHNLLSPAFVDIEDELARKI
VRLLVLHHHPVEDPSVENVEKVLKEEFGFEKIPIRFMLKKTETDYLRDDVAKIFNISIDE
LIGYYRLLKGLLLRIDHASSSKKTQEVEDNPPEDTLNFVDEFFKSTKRVPNEMQIFVKEN
RDKNLLIIAPTGSGKTEAGLIYLKKKGFFMLPYRVSANGIYTRAEGILKDYAGLLHSSAL
SYVLEKEYSTEDIQNNKGDSIFLNYFLSRNFAKPIIISTPDQLMHFVFRYKGFEKYYATT
LYSRLVIDEIQSYDPITLAFMVKALEIIIQNGGKFLVMTATFPEFLRDRFKNMGVVYKEL
NLQPMIYHNIQVIDDTIDNYVDIINNLSKNAKVLVVVNTVKKAIEVKEKLSNANLLHSRF
ILKDRKDKEKKIKEFFDANSNGAWITTQLAEVSLDLDADYLFTELSTADSLIQRMGRCNR
KGEKPTDKPNVFVFTKDCSGIGKVYYKHLFESTLKNLKDGLWDWAFKWKLVENVYSEQSL
KGTKYLERFNKAEEYIKSLWEGTDSLIRSKSQAQELFRDINTISAIPIKFESEVENLMQK
WEAVKGNLKERTKIFNEILEYTISVPEWSLKKIKLQKANEKLRRFGVYYLEGDYSEDTGF
VIKPEADLEQIDNII
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgaagaaaatattacagaatctgcttgaagagcgttgggcaaaagatgatggaactact
ataagagaccacacagacaaacttttagaaaactgtgaaaaactaaaaaattactacaaa
caagagatagaagagcttatgcccaaagggcttccctatgagctaaaagaaagattttgg
gagatcttgaaacttgcctgtgaataccacgactatggaaaaatacactgtaaatttcaa
gaaaaacttggaaacaaaaacctaaagtgcgaaaagcctataaaagaacttccagaagta
aggcacaaccttttatcaccggcatttgtagacatagaagatgaactagcccgaaagatt
gttaggcttttggttttacaccatcatcctgtagaagacccatctgttgaaaatgtagaa
aaagttctaaaagaagagtttggttttgaaaaaatccctattagatttatgctgaaaaag
actgagacagattacttaagagatgatgtagcaaaaatctttaacatttctatagatgag
ctaattggttattaccgcctattaaaaggccttttgcttcgtatagaccatgcaagtagc
tcaaagaaaacacaagaggtggaggataacccaccagaggatacacttaattttgtggat
gagttttttaaaagcactaaaagagtcccaaacgaaatgcaaatctttgtcaaagaaaat
agagataaaaaccttttgataatagctcctactggttcaggtaaaacggaagcaggtcta
atctatcttaaaaagaagggcttttttatgttgccctacagggtttccgccaatggcatt
tatacaagggcagaaggaattttaaaagattatgcagggcttttgcactcaagtgcctta
agctatgtgctcgaaaaggaatatagcacagaagatattcaaaataacaaaggcgattca
atatttttaaactactttctttctcgcaattttgccaagcctataataatatctacacca
gatcaacttatgcactttgtttttagatacaaaggttttgagaagtattacgcaaccacc
ctttactcaaggcttgtaatagatgaaattcaatcttacgacccaattaccttagctttt
atggtaaaagcgttggaaataataatacaaaacggtggtaagtttttggtaatgacagct
actttcccagaatttttaagagataggtttaaaaatatgggcgtagtatataaagaatta
aacctacagcctatgatatatcataatattcaggttatagacgatactatagataactac
gtagatattataaacaatctctctaaaaatgccaaagtgcttgtggtggtaaatactgtg
aaaaaagcaatagaggtaaaggaaaagctttcaaatgccaatctcttacacagtaggttc
atactaaaagacagaaaagataaggaaaaaaagataaaagagtttttcgatgctaatagc
aatggtgcctggattaccactcagcttgcagaggtatctttggaccttgatgcagattat
ctttttactgagctttccactgcagatagcctaatacagcgtatgggaaggtgcaacaga
aaaggtgaaaaaccaaccgacaaacccaacgtgtttgtgtttacaaaagactgttctggt
ataggcaaagtttattacaagcatcttttcgaaagcaccctaaaaaatctcaaagatggt
ctttgggattgggccttcaaatggaaacttgtagaaaatgtctattcggaacaatcttta
aaaggcacaaagtatctagagcgttttaataaagctgaggaatatataaaaagcctttgg
gaaggaacagatagtctcataagaagcaaatctcaagctcaagagctttttagagatata
aacacaatatcagcgattcctattaagtttgaaagtgaggtagaaaatctaatgcaaaag
tgggaagcagtgaaaggaaacttaaaagaaagaacaaagatttttaacgagatacttgaa
tacaccatatctgttcccgaatggtctttaaagaaaataaaactccagaaagctaacgaa
aaacttagaagatttggtgtttactatttggaaggggattatagcgaagatactggcttc
gttataaaacctgaagcagatttagagcagatagataacattatttga

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