Hydrogenobaculum sp. HO: HydHO_1378
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Entry
HydHO_1378 CDS
T02482
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K16080
high affinity Mn2+ porin
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hho02000
]
HydHO_1378
Transporters [BR:
hho02000
]
Other transporters
Pores ion channels [TC:
1
]
HydHO_1378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AGG15689
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All DBs
Position
complement(1297965..1299401)
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AA seq
478 aa
AA seq
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MEVKIFFMRKTLFLVFFPCALAFGENLPPWFPQFLGMKATFVGQYSTNFNSPYEGPMTFG
NPYKNNGGGRSEEVTQSYGLYTGAQLTKDIQAYLDIQLFKGNGVGYGQGIGGYPNFLYIR
AGSSDLGKNPYIARAYIIYTKALSQSLEYEGRAPDQLPGYYPKEYFYIKIGKFSLADDFD
NNRYANSPRTQFLNYDFNDNVAWDYGADTRGYTVGVESGVVKKHYSFKIALGAEPTMANG
NTYDQSGAYSLNTQLSLRPNDIGTVIRLLGMLNYGRMGSYTEAMDNFSYYYSPNSPCYYT
KFGPNGALAGYDYPVICTESKDHKRYKWGFFLNLEQPIADDGKTGLFLRAGFNNGQTEDF
AYTDADRDIAGGISINGVHWKRPKDQLGIGLAINALSNTHKRYLESGTINEPSSSFFVGS
GQNGQFNYGYEEIMEAYYKYQLNKYISISPDAQYIRHPGYDKNRGPLWVYGLRVNAQF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaattttttttatgagaaaaactttgtttttggtgttttttccttgcgct
ttagcctttggcgaaaaccttcccccttggtttcctcaattcttaggtatgaaagcaaca
tttgtgggtcaatactctacaaacttcaactccccttacgaaggacctatgacctttggt
aatccatataaaaacaacggtggtggaagatccgaagaggtaacccagtcttatggttta
tacacaggagcacagcttacaaaagatatccaagcttatcttgatatacagctttttaaa
ggaaacggcgtaggttatggtcaaggaataggtggttatccaaacttcctttacataagg
gcagggtcatctgatcttggcaaaaacccatatatagcaagagcttatattatatacaca
aaagccctatctcaatctttggagtatgaaggaagagctccagatcagcttccagggtac
tatccaaaagaatatttttatatcaagataggaaagttttccctagcagatgattttgat
aacaaccgatatgctaactctccaagaactcagtttttaaactatgattttaacgacaac
gtagcttgggattacggagcagatacaagaggatacacagtaggtgtagaatctggtgtt
gttaagaaacactattcttttaaaatagctttaggggcagaacctaccatggcaaacggc
aacacctacgatcagtctggagcttacagtctaaacacacagctttctctaagaccaaac
gacataggaactgtgataaggcttcttggcatgctaaactacggtaggatgggaagctat
actgaggctatggataattttagctattattattctccaaatagcccttgttattacaca
aaatttggaccaaatggagctttggcaggatatgattaccctgttatatgcacagagtca
aaagatcacaaaagatacaaatggggatttttcctaaacttagaacaacctatagcagat
gatggtaaaacaggactctttttaagagctggttttaacaacggacaaacagaagatttt
gcctacaccgatgcagatagagacatagcaggcggtatttctataaacggcgttcattgg
aaaaggcccaaagatcaacttggtataggccttgccataaacgccctttcaaacacccac
aaaagatatttggaatcaggtaccatcaacgaaccatcatcttcattctttgtaggctca
ggtcaaaacggacaatttaactatggctatgaagaaataatggaagcttactacaagtat
caactaaacaagtatatatctatatctccagatgctcaatacataagacatccagggtat
gataagaatagaggtcctttgtgggtttatgggcttagagtaaatgcacagttttag
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