KEGG   Hydrogenobaculum sp. HO: HydHO_1555
Entry
HydHO_1555        CDS       T02482                                 
Name
(GenBank) type II secretion system protein D (GspD)
  KO
K02453  general secretion pathway protein D
Organism
hho  Hydrogenobaculum sp. HO
Pathway
hho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hho00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HydHO_1555
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hho02044]
    HydHO_1555
Secretion system [BR:hho02044]
 Type II secretion system
  General secretion pathway protein
   HydHO_1555
SSDB
Motif
Pfam: Secretin Secretin_N
Other DBs
NCBI-ProteinID: AGG15860
LinkDB
Position
complement(1485517..1487775)
AA seq 752 aa
MKNKKFLAIFGASTLLFYSCAMTPKEANQITVTKQIKKPQENEKKNNLGVISEGFPTNVN
PLEPIPIPDFYKKPKNTATAPPPPPEKNKKLDLSKVKIGTKEPVAINVQNMPLGDFVQYA
LGQVLKVPYFIDQATQNNKTPVTINMPVKLKPQDVLKLVLGLLEKNNVEVSEKGGALYLN
AKPTNVTPSPPQEVVFSRKALNTFQTITQIVPLKYIDPNTAINLIHNIYHSSLDVQIFPK
ANALMMTGPGYSIKSLIDFLDAIDIPYMKNKKPVLLHLTYWSPQDFVKQISSILEGLNIP
IAQNPNQPGVLFVPIDYLNSVMVIPPDSKTLKLIMYWDKKLDTAESAGTEEKAYIYKPRF
TRATELVQALQSLYSITSTTTAKSGKTPTLKSSPVISPQEAAGQLNTLAGPSAYGNYAGM
SPYGGMGSAIVPSMQGAVPTSNFNTGPEVLAFSSKDLRIAADDRTNTILIVATPTKYKLV
RSLLQELDKPPKQVLIKTTIAEVTLTGSLQYGIEWYIQNRFKKGTYTVSTLGNLGVATSG
GLVATYITDSKIFQALLNMFAQKNKVKILSTPTLLVLNNHPASIDVGTQVPVINSQATSI
NVPSTTGGAGIIQSVQYVNTGIILNVLPTIETNNLVNLNIYQEDSTAQPNNTSGINSPII
LTRNINTTVVVPNGGTVILGGLISQQKGTGVSEIPILGDIPILGNLFKNTSINNTKTELI
IMLTPYIITDTEEAQKITDEIKSELSFYKDLK
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgaaaaataaaaagtttttagcgatctttggtgcatctacgcttttattttactcttgc
gctatgacaccaaaagaggcaaaccagataacagtgacaaaacagataaaaaaaccacaa
gaaaacgaaaaaaagaacaacttaggtgttatatcagaaggttttccaacaaacgtaaat
cctttagaacccatccccataccagatttttacaaaaaacctaaaaacactgccacagca
cctcccccacctcccgaaaaaaacaaaaaacttgatttatcaaaggtaaaaataggaacc
aaagaacctgtagcgataaatgtacaaaacatgcctcttggggattttgtccaatacgct
ttgggacaggtgttaaaggtaccttattttatagaccaagccacccaaaacaacaaaaca
cccgtaactataaacatgcccgttaaactaaaaccgcaggacgtacttaagttggttttg
gggcttttagaaaaaaacaacgtagaagtatctgaaaaaggaggggctttgtatctaaat
gcaaaacccacaaacgtaactccttcgcctcctcaggaagtagtattttcaagaaaagcc
ttaaacaccttccaaacaataacccagatagtaccgcttaaatacatagacccaaacacc
gccataaacctcatacacaacatataccattcaagcttggatgtgcagatattcccaaaa
gcaaacgccctaatgatgacaggacctggttattctatcaaaagcctcatagacttttta
gatgccatagatatcccttatatgaagaacaaaaaaccggtactccttcatctaacctat
tggtctccacaagattttgtaaaacaaatatcaagcatattagaaggtctaaacataccc
atagctcaaaacccaaaccaaccgggcgtgctttttgtacctatagattatctaaacagt
gttatggtgatacccccagacagcaaaaccctaaagcttattatgtattgggataaaaag
cttgatacagcagaatcagcgggcaccgaagaaaaagcttacatatacaaaccaaggttt
acaagggccacagagctcgtacaagcactacagtctttatacagcataacatctacaacc
actgccaaaagcggaaagaccccaacgcttaaatcaagccctgtgatatcaccccaagaa
gcggccggacagctaaacaccttggcaggtccaagtgcctatggaaattacgccggcatg
agcccttatggaggtatgggaagtgccatagtaccctcgatgcagggagcggtacccact
tcaaacttcaacaccggtccagaggtgttggccttttcctcaaaagatctaaggatagca
gcggacgatagaacaaacaccatacttatagtagccacgcccaccaaatacaaattggta
agaagtttgctccaagagttggacaaaccaccaaagcaagtgcttataaaaaccacgata
gccgaagtaacactaactggctcactgcaatacggtatagagtggtatatacaaaacagg
tttaaaaaaggtacatacaccgtatccaccttaggaaacttaggagtggcaacatctggg
ggattggtggccacatacatcacagattcaaagatattccaagccctccttaacatgttt
gctcaaaaaaacaaggttaagatactatcaacgcctacactccttgttctaaacaaccat
ccagccagcatagatgtgggtactcaagtacctgttataaattctcaagctacctcgata
aacgtaccatccactacagggggcgctggtatcatccaaagcgttcagtatgtaaacacc
ggtatcatactaaacgtacttcctaccatagaaaccaacaacttggtaaacctaaacata
taccaagaagacagcacagcccagccaaacaacacctccggcataaactcccctatcata
ctaacaagaaatataaataccaccgtggtagtgccaaacggaggcaccgtaatactcggt
ggtcttatatcccagcaaaaaggcacaggtgtatctgaaataccaattttgggagatata
cctatattgggtaatttatttaaaaatacatccatcaacaacaccaaaacagagctaata
atcatgcttacaccttacattatcacagatacagaagaagctcaaaagataacggatgaa
ataaaaagcgaacttagtttttacaaggatctaaaatga

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