Hydrogenobaculum sp. HO: HydHO_1606
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Entry
HydHO_1606 CDS
T02482
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hho03009
]
HydHO_1606
Enzymes [BR:
hho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HydHO_1606
Ribosome biogenesis [BR:
hho03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HydHO_1606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
MTS
Motif
Other DBs
NCBI-ProteinID:
AGG15908
UniProt:
M1QKY7
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All DBs
Position
1539687..1540934
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AA seq
415 aa
AA seq
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MIVEIEKLVHNGYGIGRFQNRVYFVPFTLPNEKVKIKDIINRKDYSMAKLETVLEPSPHR
IEPICPYFGRCGGCHFQHIDYTEQLNQKSNILKETLKKIGNIEIENLNGIIYDEPFYYRN
RVKFKVSDKEIGFVGVDEDFVNIEHCPISSKAINDLIPFLKEFAKHFNPSWISVFYSDTQ
KEYIIKFASYDYIDKEKLKKFKEHLTPKNVVGITLIKDDNKEDKIIFSIGTPFTFIELLE
IKYRISINSFFQVNIKVAQKLLQTLLEKENYFDRVLDDYGGVGLFGLHLARRVGSVDIAD
INKSSINDAEYSAKINNINNASFYVQNSYIFLKKSLSKHANLLVLDPPRSGLSKEEIDLI
LLGKPDYIWYISCEPSSLARDLKLLGRKYKIKEIYMADMFPQTYHIETAVKLELV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagaaattgaaaaacttgttcacaacggctacggaataggaagatttcaaaac
agggtatattttgtgccttttactttaccaaatgaaaaagttaagataaaagatattata
aacagaaaagattattctatggctaaattagagactgttttagaaccaagtccccatagg
atagagcccatttgtccttactttggaagatgcggtggatgtcattttcaacatattgat
tataccgaacagctaaatcaaaaatcaaacattctaaaagagacgttaaaaaagataggt
aacatagagatagagaatttaaacggcattatctacgatgaacctttttattatagaaac
cgtgttaagtttaaggttagtgataaagagattggttttgttggtgttgatgaagatttt
gtaaatatagagcactgccctatttcttcaaaagctataaacgatcttatacccttttta
aaagagtttgccaagcattttaatccatcttggataagcgtgttttattcggatacgcaa
aaagagtatataataaagtttgcctcttacgattatatagataaggaaaagctaaaaaag
tttaaagaacatcttactcctaagaacgtcgttggcataacgcttataaaggatgataat
aaagaagataaaattatattttcaataggaactccttttacttttattgagcttttagaa
ataaaatatagaataagcataaatagcttttttcaagtaaatataaaagtagctcaaaaa
cttttacaaacgcttttagaaaaagaaaattattttgacagagtattggatgattatggt
ggtgtaggactttttggcttgcatttggcaagacgagtaggctctgttgatatagctgat
ataaataaaagctcaataaatgatgccgaatactcagccaagataaacaacataaataat
gcatctttttatgtccaaaacagctatatctttttgaaaaaaagcctatctaaacacgca
aaccttcttgttttagacccaccgcgtagtggtttatcaaaggaagagatagaccttata
cttcttggaaaacctgattacatatggtatatatcctgtgagccttcttctttggcaagg
gatttgaagcttttaggaagaaaatataaaataaaagaaatatatatggcagatatgttt
ccgcagacttatcatatagaaaccgctgttaagctagagcttgtatga
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