Helicobacter pylori Shi112: HPSH112_00895
Help
Entry
HPSH112_00895 CDS
T02037
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSH112_00895 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhp01007
]
HPSH112_00895 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhp03016
]
HPSH112_00895 (lysS)
Enzymes [BR:
hhp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HPSH112_00895 (lysS)
Amino acid related enzymes [BR:
hhp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPSH112_00895 (lysS)
Transfer RNA biogenesis [BR:
hhp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSH112_00895 (lysS)
Prokaryotic type
Other AARSs
HPSH112_00895 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AFI00415
LinkDB
All DBs
Position
175559..177064
Genome browser
AA seq
501 aa
AA seq
DB search
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESI
VGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFAT
KTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKI
IYNDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLEQSIKVEPDLTYGKLLA
EAFDHFVEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNVESEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaccaatacatccaacaacgcatccataaagccaacagcttgagagaagaa
gggaaaaacccttataaaaacggcttgaaacgaagccttacaaacgccgcttttttagaa
aaatacgcttatgttaagggtttagaagagcctaaagacaaggaaaaatgcgaaagtatt
gtagggagggtcaagcttttgcgtttaatgggtaaggcttgttttattaaaattgaagat
gaaagcgcgattttgcaagcttatgtttcgcaaaatgaattgaacgatgaatttaaaagc
ctgaaaaagcatttagaagtgggcgatattgtgttggtgaaaggtttcccttttgctacc
aaaaccggtgaattgagcgttcatgccctagaatttcatattttaagcaaaaccattgtg
cctttacccgaaaaattccatggactgagcgatatagaattgcgttaccgccagcgctac
ttggatttgatcgtcaatcctagcgttaaagatgtgtttaaaaaacgcagtttgattgtt
tctagcgtgcggaaattctttgaaacggaagggtttttagaagtggaaacccccatgatg
caccccattcctggcggggcgaacgcaaggccttttatcacttaccataacgctttagaa
attgaaaggtatttaagaatcgctccagaattatatctcaagcgcttgattgtggggggt
tttgaagcggtgtttgaaatcaatcgcaatttcaggaatgagggcatggatcacagccat
aaccccgaatttacgatgattgagttttattgggcgtatcacacttatgaagatttgatt
gaacttagtaagagattatttgactacttgctaaagactttgaacttaccttcaaaaatc
atttataacgatatggaagtggatttcaaccaaacgagcgtgatttcctatttggacgct
ttagaaacaatagggggcattagtaaggatattttagaaaaagaagacaggcttttggct
tatttgttagagcaaagtattaaagtagagccagatctcacttatggcaaattgctcgct
gaagcgtttgatcattttgtagagcaccagctcattaaccccacttttgtaacccaatac
cccattgagattagccccttagccagacgcaacgatagtaaccctaatattgctgacagg
tttgaattgtttattgccgggaaagaaatcgctaacggctttagcgagttgaacgatcct
ttagatcaattagaacgctttaaaaatcaagtggctgaaaaagaaaaaggcgatgaagaa
gcccaatacatggatgaagattatgtgtgggcgttagcccatggaatgccccccactgca
gggcaaggcataggcattgatagattagtgatgctactcactggagctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatgtggagagtgaa
gaataa
DBGET
integrated database retrieval system
