Helicobacter pylori Shi112: HPSH112_00900
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Entry
HPSH112_00900 CDS
T02037
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00260
Glycine, serine and threonine metabolism
hhp00460
Cyanoamino acid metabolism
hhp00630
Glyoxylate and dicarboxylate metabolism
hhp00670
One carbon pool by folate
hhp00680
Methane metabolism
hhp01100
Metabolic pathways
hhp01110
Biosynthesis of secondary metabolites
hhp01120
Microbial metabolism in diverse environments
hhp01200
Carbon metabolism
hhp01230
Biosynthesis of amino acids
hhp01240
Biosynthesis of cofactors
hhp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPSH112_00900
09102 Energy metabolism
00680 Methane metabolism
HPSH112_00900
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPSH112_00900
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPSH112_00900
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPSH112_00900
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPSH112_00900
Enzymes [BR:
hhp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPSH112_00900
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
HrcA
Motif
Other DBs
NCBI-ProteinID:
AFI00416
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All DBs
Position
177064..178314
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggacagtgaaatttttgagcttatctttgaagaatat
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcactcaggttcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttgggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttagatggctatattgattatgaagaagcactaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgtgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggagcgttactattaggcgatatagcccat
gtggcaggacttgtggtaaccggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcacaattagtgaaatctaacatgcaagttttggctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagac
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagtgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccagtcaattccctgtgtatcaacaacctattttttaa
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