Helicobacter pylori Shi112: HPSH112_00940
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Entry
HPSH112_00940 CDS
T02037
Symbol
frdB
Name
(GenBank) fumarate reductase iron-sulfur subunit
KO
K25995
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00020
Citrate cycle (TCA cycle)
hhp00190
Oxidative phosphorylation
hhp00620
Pyruvate metabolism
hhp00650
Butanoate metabolism
hhp00720
Other carbon fixation pathways
hhp01100
Metabolic pathways
hhp01110
Biosynthesis of secondary metabolites
hhp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HPSH112_00940 (frdB)
00620 Pyruvate metabolism
HPSH112_00940 (frdB)
00650 Butanoate metabolism
HPSH112_00940 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HPSH112_00940 (frdB)
00720 Other carbon fixation pathways
HPSH112_00940 (frdB)
Enzymes [BR:
hhp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HPSH112_00940 (frdB)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
HPSH112_00940 (frdB)
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_16
Fer4_9
Fer2
Fer4_7
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
AFI00421
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All DBs
Position
complement(184001..184738)
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AA seq
245 aa
AA seq
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MSDNERTIVIRVLKFDPQSAVSKPHFKEYQLKETPSMTLFIALNLIREHQDPDLSFDFVC
RAGICGSCAMMVNGRPRLACKTLTSSFESGMITLMPMPSFTLIKDLSVNTGDWFGDMTKR
VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPNFIGAAGMN
RAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRMLK
VGKSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatgaacgaacgattgtaatcagagtgctaaaatttgaccctcaaagcgcg
gtgagtaagccgcattttaaagagtatcaattgaaagaaaccccatccatgacgctcttt
atcgctttaaacctcatcagagagcatcaagatccggatttgagctttgattttgtgtgc
cgcgctgggatttgcggctcttgcgcgatgatggttaatgggagaccaagattggcttgt
aaaactctaacttctagctttgaaagcgggatgattacgcttatgcccatgcccagtttt
acgctcattaaagatttgagcgtgaatacaggcgattggtttggcgatatgactaaaagg
gtggagagttgggcgcattctaaagaagaagtggatattactaagccggaaaaaaggatt
gagcctgatgaagcccaagaagtctttgaactagacaggtgtattgaatgcgggtgctgt
atcgcttcttgcgggactaaactcatgcgccctaatttcattggagctgctggcatgaac
agagccatgcgtttcatgattgacagccacgatgaaagaagcgatgacgatttttatgag
ttagtcggcgatgatgatggtgtttttgggtgcatgagcttgatcgcttgccatgacact
tgccctaaagaattacccttgcaaagcagtatcgccactttgcgtaataggatgttgaaa
gtgggtaaaagccgctaa
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