KEGG   Helicobacter pylori Shi112: HPSH112_01260
Entry
HPSH112_01260     CDS       T02037                                 
Name
(GenBank) type IV secretion system protein VirB9
  KO
K12049  ComB9 competence protein
Organism
hhp  Helicobacter pylori Shi112
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhp02044]
    HPSH112_01260
Secretion system [BR:hhp02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPSH112_01260
SSDB
Motif
Pfam: CagX
Other DBs
NCBI-ProteinID: AFI00481
LinkDB
Position
242921..244558
AA seq 545 aa
MTRVFGGISFAISLLAPLLAENNIQNYNEPMDYSKGDVSLQPFNNQTNQETQPSANHNTQ
PNSMQTPMPNQNSYSQPTTPIQNNQPNNAQTQTMLNNAKQFTNNALNNTKQTITNTTNYV
NNKLSPKPNDVPISAFKDNRDLNNQIEPNTSNHETKESDENSDSTLKPMTNFNAIQNNFF
AKNRSIKDNAHFIHYTIGDTFNIRLRYAMTTTFIFDEPIAQVVLGDDIGFSTKMLGEDKE
HLISNILLIKPLQIGVDSNLTIIGKSGKVYSFYVFSTTYTSSKNPALMVYVSSKEYFKHF
TSSKKETNKEIKTTHSTPNKDIKVSHAPKKIAKKSPSIKEQNLKSKNPTTTKTAIENAPL
SLNRFKSPSYPPSNALANSRKASENFKVISNSAKTFKEHRHSQDEMKYVDYSAKIKDDGK
FIRIGDNVNHIYINKKKMEYGYVIIDKKKRKWYCLWMCKKVVKSKYKDDLPTQIFNDEQF
TYFKFNRSNARSKFPVVYKVVDGYDNPVNSRVVGDYLIAEDVSNQWNLKLGKAYLCIEKI
AKRAK
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgactagagtatttgggggaattagttttgcaatatcactcttagctcccttattagca
gaaaataacattcaaaattataatgagccaatggattattcaaaaggcgatgtttcctta
caaccgtttaataaccaaactaaccaagaaacacaacctagcgctaaccacaacacacag
cctaattctatgcaaacacctatgccaaatcaaaactcttattcacaacccactacacct
atacaaaataaccaaccaaataacgcacaaactcaaacaatgctaaataacgccaagcaa
ttcactaataacgctcttaataacactaagcaaactatcactaacaccactaattatgtc
aataacaagcttagtccaaaacctaatgatgtgcctattagtgcgtttaaagacaataga
gaccttaataatcaaatagaacctaatacatcaaatcatgaaactaaagaaagcgatgaa
aatagcgatagcaccctaaaacccatgactaattttaacgctatccaaaacaacttcttt
gctaagaaccgctctatcaaagataacgctcattttatccattacaccataggcgatact
ttcaatattcgcctaagatacgccatgacaaccacttttatctttgatgaacccattgct
caagtagtcttgggcgatgatataggtttttccactaaaatgctaggcgaagataaagag
catttgatttctaatattttgctcattaagcctttgcaaattggagtggatagcaacctt
actatcattggaaaaagcggtaaggtgtatagcttttatgtgttttcaaccacttatacg
agttctaaaaacccagccttaatggtgtatgtgtcttctaaagagtattttaaacatttc
actagctccaaaaaagaaactaataaagaaattaaaaccactcatagcaccccaaacaaa
gacattaaagtaagccacgctcctaaaaagatagctaaaaaatcaccaagcattaaagaa
caaaacctaaagtcaaaaaaccctactaccactaaaacagcaatagaaaatgctcccctt
tctttaaatcgtttcaaatcccctagttatccccctagtaacgctctagctaattctaga
aaggcttcagaaaattttaaagtgattagtaatagcgctaaaacttttaaagagcataga
cacagccaagatgaaatgaaatatgtggattactccgccaaaatcaaagatgatggcaag
ttcattaggattggggataatgtcaatcacatctatatcaacaagaaaaaaatggaatat
ggttatgtcatcatagacaagaaaaaacgcaaatggtattgcttatggatgtgcaaaaag
gttgttaaatctaaatacaaagatgatttacccactcaaatctttaatgatgagcaattc
acctattttaagttcaaccgctctaatgctagaagtaaattccctgtggtttataaggtt
gtagatggctatgataatcctgttaatagcagagtggtaggcgattatctaatcgctgaa
gatgtttcaaatcaatggaatttaaagcttggtaaagcctatctttgcatagaaaagata
gcaaagagagcaaaatga

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