Helicobacter pylori Shi112: HPSH112_02100
Help
Entry
HPSH112_02100 CDS
T02037
Name
(GenBank) multidrug resistance protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPSH112_02100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhp02000
]
HPSH112_02100
Enzymes [BR:
hhp01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HPSH112_02100
Transporters [BR:
hhp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HPSH112_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
AAA_22
RsgA_GTPase
AAA_16
DEAD
ABC_ATPase
AAA_29
KAP_NTPase
nSTAND1
Ribosomal_L10
nSTAND3
AAA_5
cobW
DUF87
AAA_30
NACHT
Motif
Other DBs
NCBI-ProteinID:
AFI00639
LinkDB
All DBs
Position
424747..426402
Genome browser
AA seq
551 aa
AA seq
DB search
MKLFFRRYSKYLKEHYKSFIVVLFSSLVVALSTAWGTYLVKPTLDEIFINKDTHMLKILP
FLVILAYLGKSGGMYLGTYFTNFIGLDIVKKIRNTMLESLLKMEMDFFNRTKKGELIARI
TNDIGLIRASLSNYLSESIREGLTIVGLVGVVVYQSPKLALVGLVIMPLAAIPISKIIRK
VKKLAKSHQESNAKITSRLSEVFNNVEAIKISNGEKLEHKAFVKENEAFFKIGIKNIAVA
EISSPLMEFLGSIAIALVIYLGGNEVIRGHISVGAFFSFITALFMLYTPIKRLTRIVSNF
QEALVASDRIHEILEREPAIVDGELTLNDAIHTIEFKKVWLAYTLDNQERYVLSDISLKF
QQNEIIALKGESGSGKSSLVNLILRLYEPSKGEIFINDQKIESITQKSLREKISVVTQRV
FIFNGSVAENVAYGLEIDEVKIKECLKKAQALDFVEKMPHGIESVLDEFGANLSGGQRQR
IAIARALYKDAQVLIFDEATSALDNNTEESVKQSILELKQNRLIILISHNPSTLKLATKH
VKLEHGRLIEC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactctttttcaggcgttattctaaatatcttaaagagcattataaaagttttata
gtggttttattttcttctttagtggtggctttaagcacggcttgggggacttatttggtc
aagcccactttagatgaaatttttatcaataaagacactcacatgcttaaaatcctgcct
tttttagtgattttggcgtatttgggcaagagtgggggcatgtatttagggacttatttc
actaactttatcgggcttgatattgtcaaaaaaatacgcaacaccatgttagaaagcctt
ctcaaaatggaaatggatttttttaacaggactaaaaagggcgaattgatcgcaaggatc
accaatgatataggtttgatcagagcgagtttgtccaattacctttcagagagcataaga
gaagggctaacgattgttgggttagtgggggtggtggtttatcaaagccctaaattagcg
ttagtggggctagtgatcatgccgctagccgctattcctatcagtaaaatcattcgtaag
gttaaaaaactcgctaaatcccatcaagagagtaacgccaaaatcacctctcgtttgagt
gaagtctttaacaatgtggaagcgattaaaatctctaatggcgaaaagttagagcataag
gcttttgtgaaagaaaatgaagcgttttttaaaatcggcatcaaaaacatcgccgtggct
gaaatttcttcgcctttaatggagtttttaggctctatcgctatagcgctagtgatttat
ttaggggggaatgaagtgattagaggccatattagcgtgggggcgtttttttctttcatc
acggccctttttatgctctatacgccgatcaaacgcttgactaggattgtttctaatttt
caagaagccttagtcgctagcgacagaatccatgagattttagaaagagagccggctatt
gttgatggggaattaacgctaaatgacgctatacacaccatagaatttaaaaaagtatgg
ctggcttatacgctagacaatcaagagcgttatgttttaagcgatattagtttgaaattc
caacaaaatgaaatcatcgctttaaaaggcgaaagcgggagcggtaaaagctcgttagtg
aatctgatcttacgcctttatgagccaagcaagggcgaaattttcatcaacgatcaaaaa
atagagagcatcactcaaaaatccttgagagaaaagattagcgttgtcactcaaagggtg
tttatctttaacgggagcgtggctgaaaatgtggcgtatggtttagaaattgatgaggta
aaaatcaaagaatgcttaaaaaaagctcaagccttagattttgtggaaaaaatgcctcat
gggatagagagcgttttagatgaatttggcgctaatcttagcggcggccaacgccaaaga
atcgccattgcaagagctttgtataaagacgctcaagtgttaatctttgatgaggccact
tccgctttggacaataacacagaagagagcgttaaacaaagcattttagaattgaaacaa
aatcgtttgatcattctcatctcgcacaacccaagcacgctaaaattagccactaagcat
gtgaaattagagcatgggcgtttgatagaatgctaa
DBGET
integrated database retrieval system
