Helicobacter pylori Shi112: HPSH112_02210
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Entry
HPSH112_02210 CDS
T02037
Name
(GenBank) putative site-specific DNA-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00270
Cysteine and methionine metabolism
hhp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HPSH112_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhp03000
]
HPSH112_02210
03032 DNA replication proteins [BR:
hhp03032
]
HPSH112_02210
03036 Chromosome and associated proteins [BR:
hhp03036
]
HPSH112_02210
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hhp02048
]
HPSH112_02210
Enzymes [BR:
hhp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
HPSH112_02210
Transcription factors [BR:
hhp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
HPSH112_02210
DNA replication proteins [BR:
hhp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
HPSH112_02210
Chromosome and associated proteins [BR:
hhp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
HPSH112_02210
Prokaryotic defense system [BR:
hhp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
HPSH112_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
UvrA_inter
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
AFI00661
LinkDB
All DBs
Position
complement(444477..446591)
Genome browser
AA seq
704 aa
AA seq
DB search
MLTYADLFAGIGGFRLALDSLGLKCVFSAENNPHAIAMYQANFDDDSTCDITLLNPNTMP
NFDILCAGFPCQAFSVCGKQKGFEDTTRGTLFFDICRILKNKKPKIFILENVKNLLKHNK
GNTLFVMLQALSNLGYSVSYQILNAKNFSVPQNRERIIIVGYLGSQVFDFNPIKTNPITD
MQNFLDKSGHFEILEPYEYTLLDNQLLKRQNSGLIFCGYRNKKIRTKGTRENTEHLSRVH
KQPNRIYHVKGIHPTIASQEQSGRYFIYTDNLVRKLTLNECFSFMGFPKDFKKIGTNSQL
YERIGNSVCVPMIKAIMKEVLNQFYKQPLKENNMQNKILEFLEKIYKECVSLKNLDSLNL
SKTQLQKAQMIVEKEETFKGVYTVLITSLVYKSNYHEQDIRFHQANMKNGYSGRSFDTKF
ITPFLKQKQFLGAMKESGWLTRSLEQNLPYTIDYPGKISSVSIKKAFLEILDDVEKNPNL
STPYLKALFYLSIREKTRKAIILVKPIIKESSYSIDFIINTLQKHFNYAYKSRGASILPV
VALFSIYECLILELGRFTNKSLKPLDSHYSCDRSSGNAGDIVILDEQKQLFEVIEIKFNI
AIDSIMLQDAYKKIAQTPIKRYYILSTLPIQNKTELQKIIDKIEHEHGCQVIVNGIYDTL
KYYLRLIKNTEHFINNYLKNISQNTEINEEHKLAWNNIIDSKIN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgctaacttatgcagatttatttgcaggtatcggtggttttagacttgctttagattct
ttagggttaaaatgtgtttttagtgcagaaaacaatccccatgccatagccatgtatcaa
gcaaattttgatgatgactccacttgtgatattactcttttaaatccaaacactatgcca
aattttgatattttatgtgctggatttccttgtcaagcattttcagtatgtggtaagcaa
aaaggctttgaagatacaacaaggggaacattattttttgatatttgtaggattttaaaa
aataagaaaccaaagatttttatcttagaaaatgtaaaaaatctcttaaaacacaataag
ggcaacacgctatttgtaatgttacaagcccttagtaatttaggttatagcgtgagttat
caaattttaaacgctaaaaatttttcagtcccacaaaatagagaaagaattatcattgta
ggatatttaggctctcaagtctttgactttaatcctattaaaacaaatcctattactgac
atgcaaaattttttagataagagtggtcattttgagattttagaaccttatgaatacact
ctattggataaccagttacttaagaggcaaaattcaggacttattttttgtggctatcgt
aataaaaaaatccgcactaaaggtacaagagaaaatacagaacatttaagcagagttcat
aaacagcctaataggatttatcatgtgaagggtatacaccccaccattgctagtcaagag
caaagtggtcgttatttcatttatacggataatttagtaagaaaattaactctaaatgaa
tgtttttcttttatggggtttcctaaagatttcaaaaaaataggcacaaactcacagctt
tatgaacgcataggcaatagcgtgtgtgttcctatgattaaggctatcatgaaagaagta
ttaaatcaattttacaaacaaccccttaaggaaaataatatgcaaaataaaattttagaa
tttttagaaaaaatttataaagaatgtgtgagcttaaaaaatttagacagcttgaattta
agcaaaacacaactccaaaaagctcaaatgattgttgaaaaagaagaaacttttaagggt
gtttatacggttttaatcacaagcttagtttataaaagcaactaccatgagcaagatatt
aggtttcatcaagcaaatatgaaaaatggatatagtggtagaagttttgataccaaattt
atcacgccttttttaaagcaaaagcaatttctaggggctatgaaagaaagtgggtggctt
acaagaagtttagaacaaaatttaccctataccatagattatccaggaaaaatttcaagc
gtttctattaaaaaagcgtttttagaaattttagatgatgtagaaaaaaatccaaactta
tctacaccatacttaaaagctctattttatttaagcattagagaaaaaacgagaaaggct
attattcttgttaagcctatcataaaagaatctagctatagcatagattttatcatcaat
acactacaaaaacattttaactacgcttataaaagtaggggggcttctatattgcctgta
gtggctttgtttagcatatatgaatgtttaatcttagagctagggcgttttactaataaa
agcttaaagcctttagattctcattatagttgcgatagaagtagtggcaatgctggagac
attgtaattttagatgaacaaaaacaattatttgaagttatagaaattaaatttaatatc
gctatagatagtattatgctacaagacgcttataaaaaaattgctcaaacacctattaag
cgatactacattttaagcactttgcccattcaaaacaaaacagaattacaaaagattata
gataaaattgagcatgaacatggttgtcaagtaattgttaatggaatttatgatacctta
aaatattacttgagactgattaaaaacacggaacattttataaataattatcttaaaaat
atctcgcaaaatacagaaatcaatgaagagcataaacttgcatggaataatattattgat
tcaaaaataaactaa
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