Helicobacter pylori Shi112: HPSH112_02315
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Entry
HPSH112_02315 CDS
T02037
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00540
Lipopolysaccharide biosynthesis
hhp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSH112_02315
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhp01005
]
HPSH112_02315
Enzymes [BR:
hhp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
HPSH112_02315
Lipopolysaccharide biosynthesis proteins [BR:
hhp01005
]
Core region
HPSH112_02315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AFI00682
LinkDB
All DBs
Position
467807..469096
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AA seq
429 aa
AA seq
DB search
MLKERLKAFFSADSVFTLIFALFFLTSFKKPLTQVLLIVLMVFLFFRCCFQASLKEIFGI
NHLKTMPFKWLTLAFLGVFLSIFPNMFNMHDSQTFRYNLFALNMSLTYACGALCLLFASC
LRIKLNQKILFYSMAVANFINGLLSLVQKIYFNMPRAQGFSTVKEYVVLVSVSILGCYIY
ALYSRNQKEKLFFTLSVFVGFLVVILSATRSATIAFIMTFLILSCFILYAKKSLKPLGYM
VVVSLILSALYMGSNALEKKGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEAL
TVLRLRPFFGMAASEKCQRLEEILSLSHSYRAKDLILCYERYDNQIIHVLATRGIIGFLI
WLFFLLVIVKIFWSGIKQNSLISLFILTTITFYLIFGIGFDPFDFFITGSFFVGMVMMAV
FLKKDKSAF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaaagagcgtttaaaagccttttttagtgcggactctgttttcactttaattttt
gcccttttctttctcacttcgtttaaaaagcctttaactcaagtcttattgattgtttta
atggtttttttgttttttaggtgttgtttccaagcgtctttgaaagagatctttggaatt
aatcatctaaaaacaatgcctttcaaatggctcactctggcttttttgggcgtgttttta
agcatcttccccaacatgtttaacatgcatgatagccaaactttccgctacaatttattc
gctctaaacatgtccttaacttatgcttgcggggcgttatgcttgctttttgccagttgt
ttaagaatcaaattgaatcaaaaaatccttttttacagcatggctgttgccaatttcatc
aacggcttgctttcattggtgcaaaaaatttattttaacatgcccagagcgcaagggttt
agcactgttaaggagtatgtggttttagtgagcgtttccattttaggctgttatatttat
gcgctttattcgcgcaatcaaaaagagaaactttttttcacgctttctgtttttgtgggg
tttttagtcgttattttaagcgctacaaggagcgcgacaatcgcttttattatgactttt
ttaatcctttcttgctttattttatacgccaaaaaatcgctcaaaccattgggttatatg
gtggttgtgagtcttattttgagcgctttgtatatggggagtaacgctttagaaaaaaag
ggggcaatagagcaatctagggttcaaaaccaaagctttgaagaagatttgaaacgctac
gctaaaaaggacgctgatagcagcatcgggtggcgtttggagcgttggaaagaagcccta
acggttttgcgtttaaggcccttttttggtatggccgctagcgagaaatgccagaggtta
gaagagattttatctttatcgcattcttacagagccaaagatttgattctttgttatgaa
agatacgacaaccaaatcattcatgttctagccactagggggatcataggctttttaatc
tggctcttttttttattagtcattgtaaagattttttggagcgggataaagcaaaactct
ttaatctcactctttatattaacgacgatcactttttaccttatttttggtattgggttt
gacccctttgatttctttattacgggaagtttttttgtaggaatggtcatgatggctgtt
tttttaaaaaaggataaaagcgctttttag
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