Helicobacter pylori Shi112: HPSH112_03305
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Entry
HPSH112_03305 CDS
T02037
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase, putative membrane protein
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00300
Lysine biosynthesis
hhp00550
Peptidoglycan biosynthesis
hhp01100
Metabolic pathways
hhp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPSH112_03305
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSH112_03305
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPSH112_03305
Enzymes [BR:
hhp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HPSH112_03305
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
DUF7217
FLILHELTA
Motif
Other DBs
NCBI-ProteinID:
AFI00873
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Position
complement(657461..658942)
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AA seq
493 aa
AA seq
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MQSLSWLNLAFRWLFITGLGYYIMTLLQWYHYSVFRILTKHHKMRWHGIYFLLPLGVFIL
SYAFTMPFVFDFFCGVIQMPMLIVWAKRNDKPLVFTPRVKRFFIFLLLFLILHEILNTEL
VPLNGISLVLAYLCLFIFVLNASLIFEKVLSKQYLQTAKDKIASLKNLKVIAITGSFGKT
SIKNFLLQILQTTFNAHASPKSVNTLLGLANDINQNLDDRSDIYIAEAGARNKGDIKEIT
RLIEPHLAVVAEVGEQHLEYFKTLENICETKAELLDSKRLEKAFCYSVEKIKPYAPKDSP
LIDYSSLVKNIQSTLKGTSFEMLIGSVWESFETKVLGKFNAYNIASAILIAKHLGLETER
IKRLVLELNPIAHRLQLLEVNQKIIIDDSFNGNLKGMLEGIRLASLYEGRKVIVTPGLVE
SNTESNETLAQKIDEVFDVAIITGELNSKTIASQLKTPQKILLKDKAQLENILQATTIQG
DLILFANDAPNYI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcttagttggctgaatttagcgtttcgttggctctttataaccgggcttggc
tattatataatgactttattgcaatggtatcattacagcgtgtttaggatcttaaccaag
caccacaagatgcgttggcatgggatttattttttattgcctttgggggtgtttatccta
tcgtatgctttcacaatgccgtttgtttttgatttcttttgcggcgttattcaaatgccc
atgctcattgtttgggccaaacgcaacgacaaacctttagttttcacgccaagggtgaag
cgcttttttatcttcttattgttatttttaatcttgcatgaaatcttaaatacagaatta
gtccctttgaatgggatttcactcgtgctcgcttatttgtgtttattcatatttgtttta
aacgcttctttaatctttgaaaaagtcttatccaagcagtatttgcaaaccgctaaagat
aaaatcgcctctttaaagaatttaaaagtcatcgccattaccggaagctttgggaaaacc
agcattaaaaatttcttgcttcaaatcttacaaaccacattcaacgcgcatgcaagcccc
aaaagcgtcaatactcttttagggcttgcgaatgatattaaccagaatttagatgatagg
agtgatatttatatcgctgaagccggagcaaggaataagggcgatattaaagaaatcact
cgcctcattgaaccgcaccttgccgtggtcgcagaagtgggcgaacagcatttagaatac
tttaaaactttagaaaatatttgcgagactaaagcggaattattggattccaaacgctta
gaaaaagccttttgttactctgtagaaaaaatcaagccctatgcccctaaagatagccct
ttaatagactattctagcctggttaaaaacatccaatccactttaaaaggcacttctttt
gaaatgcttataggtagcgtttgggaaagctttgaaacgaaggttttaggcaaattcaac
gcttataatatcgcttcagccattttaatcgctaagcatttaggattagaaacagaaagg
atcaaacggcttgttttagaactcaaccccattgcccatcgtttgcaacttttggaagtg
aatcaaaaaatcattatagacgatagctttaatgggaatttaaagggcatgttagagggc
attcgtttagcgagtttgtatgaagggcgtaaagtcattgtaacaccgggattagtggaa
agcaatacagaaagtaatgaaactttagcgcaaaaaatagacgaggtttttgatgtcgct
atcatcacaggggagttgaattccaaaacgattgcttcacaattgaaaaccccccaaaaa
atcttactcaaggataaggcgcaattggaaaatatcttacaagccaccacgattcaaggc
gatttgattttattcgctaatgacgcccccaattacatttag
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