Helicobacter pylori Shi112: HPSH112_03315
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Entry
HPSH112_03315 CDS
T02037
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00470
D-Amino acid metabolism
hhp00550
Peptidoglycan biosynthesis
hhp01100
Metabolic pathways
hhp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSH112_03315 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSH112_03315 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPSH112_03315 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
HPSH112_03315 (ddl)
Enzymes [BR:
hhp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HPSH112_03315 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
hhp01011
]
Precursor biosynthesis
Amino acid ligase
HPSH112_03315 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_TupA
GARS_A
RimK
Motif
Other DBs
NCBI-ProteinID:
AFI00875
LinkDB
All DBs
Position
complement(659651..660694)
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AA seq
347 aa
AA seq
DB search
MEFCVLFGGASFEHEISIVSAIALKEALKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLPPLILTRNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGIKALDHVLLNEKNRANALNLIGFNFPFIVKPNNAGSSLG
VSVVKEEKELIYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYIEEPNKQEF
LDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGALIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtggaattttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaagaagcgctaaaggataggattaaatattttatttttttagatgaa
aaccatcatttttatttgattgaagaatctaacatgcattcaaaatacttcgctcagatc
aaagaaaaaaaattaccccccctaatccttacgcgcaatggcttgcttaagaactcgttt
ttaggcgctaagattatagaattgcctctagtgattaatcttgtgcatgggggcgatggc
gaagacgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgccaaagactta
gggataaaggctttagatcatgttcttttgaatgaaaaaaaccgcgctaacgctctaaat
ttgattggctttaattttccttttattgtcaagcccaataatgctgggagctctttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacggcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcagggagtgaaagaatacaatttagccggt
tgcaagatcaaaaaggatttctgtttttcctatattgaagagcctaacaaacaggaattt
ttagacttcaaacaaaaatatttggatttttcacgcaataaagcccctaaagcgaatctt
tctaacgccctagaagaacaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgctcatccgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggccaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaaaatcccaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa
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